Apteryx mantelli mantelli (North Island brown kiwi): 106494285
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Entry
106494285 CDS
T04298
Symbol
SUPT5H
Name
(RefSeq) SPT5 homolog, DSIF elongation factor subunit
KO
K15172
transcription elongation factor SPT5
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106494285 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aam03021
]
106494285 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
aam03019
]
106494285 (SUPT5H)
Transcription machinery [BR:
aam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106494285 (SUPT5H)
RNA polymerase I system
106494285 (SUPT5H)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
106494285 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOWx_SPT5
Spt5-NGN
KOW5_SPT5
CTD
KOW1_SPT5
KOW2_Spt5
KOW7_SPT5
Ribonuc_P_40
Arabino_trans_N
Motif
Other DBs
NCBI-GeneID:
106494285
NCBI-ProteinID:
XP_013809977
UniProt:
A0A8B7JFY0
LinkDB
All DBs
Position
Un
AA seq
461 aa
AA seq
DB search
IGEERATAIALMRKFIAYQFTDTSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYW
NQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPR
IDFDRIKARMSLDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDL
TMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGK
VVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRGFAFLHC
KKLVENGGMFVCKTRHLVLAGGSKVGAGRLPAAGYIGVVKDATESTARVELHSTCQTISV
DRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLHDGERWGHGGDR
GDAGPGDTEGTGKRMEVEEDREDGGHLGPGDTEGTGMRGAT
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atcggagaggagcgcgccacggccatcgccctcatgcggaagttcatcgcctaccaattc
acggacacgtcggtggtggcccccgagcacgtcaagggctacatctacgtggaggcctac
aagcagacgcacgtcaagcaggccatcgagggcgtgggcaacctgcgcatgggctactgg
aaccagcagatggtgcccatcaaggagatgaccgacgtcctcaaggtggtcaaggaggtc
accaacctcaagcccaagtcctgggtgcgcctcaagaggggcatctacaaggacgacatc
gcccaggtggattacgtggagcccagccagaaccagatctccctcaagatgatccctcgc
attgacttcgaccgcatcaaagcccgcatgagcctggacatgctggagttcccggctcag
gagctgcgcaagtacttcaagatgggcgaccacgtcaaggtgatcgccgggcgcttcgag
ggcgacacgggcctcatcgtcagggtggaggagaacttcgtcatcctcttctccgacctc
accatgcacgagctcaaggtgctgccgcgggacctgcagctctgctcggagacggcgtcc
ggcgtcgacgtgggcgggcagcacgagtggggtgagctggtgcagctcgacccgcagacg
gtgggcgtcatcgtccgcctcgagcgggagaccttccaggtgctgaacatgtacgggaag
gtggtgacggtgcggcaccaggcggtcaccaggaagaaggacaaccgcttcgccgtggcc
ctcgactcggagcagaacaacatccacgtcaaggacatcgtcaaagtcatcgacgggccc
cactcgggccgcgagggggagatccgccacctcttccggggcttcgccttcctgcactgc
aagaagctggtggagaacggcggcatgttcgtctgcaagacccggcacctggtcctggct
ggcggctccaaggtgggcgccgggcgcctccccgccgcaggctacatcggcgtggtgaag
gacgccacggagtcgacggcccgcgtggagctgcactccacctgccagaccatctccgtg
gaccgccagcgcctgaccaccgtgggctctcggcgcccgggcgggatgacgtccacctac
gggcgcacgcccatgtacggctcgcagacgcccatgtacggctcgggctcccgcaccccc
atgtacggctcacagacgcccctgcatgacggtgagcgctggggacacggaggggaccgc
ggtgacgccgggcctggggacacggaggggaccgggaagaggatggaggtggaggaggac
agagaggatgggggtcacctgggtcctggggacacggaagggaccgggatgaggggggcc
acg
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