Apteryx mantelli mantelli (North Island brown kiwi): 106494601
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Entry
106494601 CDS
T04298
Symbol
XAB2
Name
(RefSeq) XPA binding protein 2
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106494601 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106494601 (XAB2)
03041 Spliceosome [BR:
aam03041
]
106494601 (XAB2)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106494601 (XAB2)
Spliceosome [BR:
aam03041
]
Complex B
Other components
Prp19-related factors
106494601 (XAB2)
Complex C
106494601 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_M
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_2
DNER_C
TPR_14
TPR_8
TPR_1
TPR_12
HAT_PRP39_C
PPR
Motif
Other DBs
NCBI-GeneID:
106494601
NCBI-ProteinID:
XP_013810342
UniProt:
A0A8B7JH02
LinkDB
All DBs
Position
Un
AA seq
547 aa
AA seq
DB search
MAMEVAWVLMVVAMAVAQAPVKHKCVSDPAYEEVNNCHERALVFMHKVRGHGDGDTEGRG
HGGTRPRGEDRVWGGHVRSGGMEGHRRMESVKDTGRGXDGHGGGLDAHGRGSDQDSGPSA
HGGCLSADDHGLGTRSYKLWYNYLKQRRKQVKHKCVSDPAYEEVNNCHERALVFMHKVRG
HGDGDTEGRGHRGTRPRGEDRVYKLWYNYLKQRRKQVKHKCVSDPAYEEVNNCHERALVF
MHKGDGEVAGGPGRRCPRPQLSPENAEEYIEYLRSIDRLDEAAVRLAVVVNDERFVSKEG
KSNYQLWHELCDLISQHPDKVKSLDAGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEK
ARDVYEEAVQTVMTVRDFTQVFDSYAQFEESVIAAKMETVSELGKEEEGLARHAMVVYER
ATRAVLPTEQYDMFNIYIKRAAEIYGVTHTRPIYEKAIEVGALGCCGLGGGRVGGRRRVG
LVLGTSCGDRITATFWQTWKDFEIRHGNEDTIREMLRIKRSVQATYNTQVNFMASQMLKV
YSNATGT
NT seq
1642 nt
NT seq
+upstream
nt +downstream
nt
atggccatggaggtggcttgggtgctcatggtggtggccatggcagtggctcaggcgccc
gtgaagcacaagtgcgtgagcgacccggcctacgaggaggtgaacaactgccacgagcgc
gccctcgtcttcatgcacaaggtgcggggacacggggacggggacacggagggacgcggc
catggggggacacggccgcggggagaggaccgggtgtgggggggacacgtgcgcagtggg
ggcatggaggggcaccgacgcatggagagcgtcaaggacacgggaaggggangcgatggc
catggaggtggcttggacgctcatggccgtggcagcgaccaagacagtggtccaagtgct
catggtggttgcttgagcgctgacgaccatggcttgggcacccgtagctacaagctgtgg
tacaactacctgaagcagcggcggaagcaggtgaagcacaagtgcgtgagcgacccagcc
tacgaggaggtgaacaactgccacgagcgcgccctcgtcttcatgcacaaggtgcgggga
cacggggacggggacacggagggacgtggccacagggggacacggccgcggggagaggac
cgggtctacaagctgtggtacaactacctgaagcagcggcggaagcaggtgaagcacaag
tgcgtgagcgacccggcctacgaggaggtgaacaactgccacgagcgcgccctcgtcttc
atgcacaagggggacggggaggtggccgggggacctggacggaggtgtccccgtccccag
ctgagcccggagaacgcggaggagtacatcgagtacctgcgctccatcgaccgcctggac
gaggccgccgtgcgcctggccgtggtcgttaacgacgagaggttcgtctccaaggagggc
aagtcgaattaccagctgtggcacgagctgtgcgacctcatctcgcagcaccccgacaag
gtgaagtcgctggacgcgggcgccatcatccgcgggggcctcacccgcttcaccgaccag
ctgggcaagctctggtgctccctggccgactactacatccgcagcggccacttcgagaag
gcccgtgacgtctacgaggaggcggtgcagacggtgatgacggtgcgggacttcacgcag
gtcttcgacagctacgcccagtttgaggagagcgtcatcgccgccaagatggagacggtc
tcggagctgggcaaggaggaggaggggctggcgcgccacgccatggtcgtgtacgagcgg
gcgacgcgggccgtgctgcccaccgagcagtacgacatgttcaacatctacatcaagcgg
gcggccgagatctacggcgtcacccacacccggcccatctacgagaaggccatcgaggtg
ggtgccctcgggtgctgcgggctggggggcggccgggtgggcgggcggcgccgcgtgggt
ttggtcttggggacgtcatgtggggacaggatcacagccaccttctggcagacctggaag
gactttgagatccgccacggcaacgaggacaccatccgggagatgctgcgcatcaagcgc
agcgtccaggccacctacaacacccaggtcaacttcatggcctcccagatgctcaaggtc
tacagcaacgccacgggcaccg
DBGET
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