Apteryx mantelli mantelli (North Island brown kiwi): 106494623
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Entry
106494623 CDS
T04298
Symbol
MBD4
Name
(RefSeq) methyl-CpG binding domain 4, DNA glycosylase
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106494623 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aam03036
]
106494623 (MBD4)
03400 DNA repair and recombination proteins [BR:
aam03400
]
106494623 (MBD4)
Chromosome and associated proteins [BR:
aam03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
106494623 (MBD4)
DNA repair and recombination proteins [BR:
aam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106494623 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
106494623
NCBI-ProteinID:
XP_013810370
UniProt:
A0A8B7JH27
LinkDB
All DBs
Position
Un
AA seq
510 aa
AA seq
DB search
PSNEAAAAAGGGGAPRGWERIVKQRRSGKTAGKYDVYFVSPEGHKLRSKGALVDYFRKTG
ETTLKPEDFDFTALSQSSTRSRAKRCSTKAVVTILEKEDCQSQVQDRSVQNGEEDKIHKV
QTGNEQLEDVSGTTTCGSKDLIVEEIKPEDCLKTKKKGAVGKSVQSKRTRRTSEKRNPDN
TQPKRQRKVCNKQENECIQNKKFCRKKDMCVSNSQGIDDQNTDPVDAGKRKTLLTEKLLI
SGSQSEIQLGSVTTHLEKELKSVAELECVEKSFNEASSAKSEEKTDEFEIRKDTDQVNPD
NQNFKSDAETDANILQPCDRKIFTEVKMLQEESIPRTQVERRKTSPYFSSKYCKEAPSPP
RRKAFRKWTPPRSPFNLVQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKKYPSPEI
ARTADWKEMSELLRPLGLYELRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYRIFCV
NEWKEVQPQDHKLNVYHAWLWENHEKLSID
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ccctcgaacgaagccgccgctgccgcgggcggcggaggcgccccgcgcgggtgggagagg
atcgtgaagcaacggcggtccggaaaaacagcggggaaatacgatgtttatttcgtcagt
cctgaaggacataaactaagatcaaaaggtgcacttgtggattattttcgtaaaactggg
gagacaactctaaaaccagaagattttgattttactgcactgtctcagagcagtacccgt
tcaagggccaaaagatgcagcacaaaagctgtggtaactattttagagaaagaggattgt
caaagtcaggtgcaagaccgcagtgtacaaaacggtgaagaagataaaattcataaggtt
caaactggaaatgaacaactggaagatgtttctggtacaaccacttgtggtagtaaagat
ttgatcgtggaagaaataaaaccagaggactgtttgaaaaccaaaaaaaaaggggcagtt
ggaaaaagtgttcagagtaaaagaactagaaggacctcagaaaagagaaatccagataat
acccaacccaaaagacagagaaaagtatgtaataaacaagaaaatgagtgcattcaaaac
aagaaattctgtagaaagaaggacatgtgtgtctctaacagtcaagggatagatgaccag
aacacagaccctgtggatgctggaaaaagaaaaactcttttaacagagaaattactgatt
tctggatcacagtcagaaatacagctaggatcagtcacaactcacttagaaaaggagttg
aagagcgtagctgagctggagtgtgtagagaaaagttttaatgaagcatcatctgcaaaa
tctgaggagaaaactgatgaatttgaaataaggaaggatacagatcaagtaaatccagat
aaccagaattttaaatccgacgctgaaacagatgctaacattttgcagccttgtgacagg
aaaatcttcacagaagttaaaatgctgcaagaagagtctattccacgaacacaggtggaa
aggaggaaaacgagtccgtatttttcaagtaaatactgtaaagaagctccaagcccacct
agaaggaaggccttcagaaagtggactcctccacgttctccttttaacttggtccaagaa
actcttttccatgatccatggaaactcctcattgcaaccatatttctcaataagacttca
ggtaagatggcaattcctgtgctctgggagttccttaagaaatacccttctcctgaaata
gcgagaactgcagactggaaagaaatgtcagagctgctcagacctcttggcctctatgaa
ctcagagcaaaaactataatcaagttttcagatgaatatctgaccaagcagtggaggtac
cccattgaactgcacggaattggaaaatatggaaacgactcctacagaatcttctgtgtc
aatgaatggaaagaggtgcagccacaggatcacaagttaaatgtatatcatgcatggctc
tgggaaaatcatgagaaattaagtatagattga
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