Apteryx mantelli mantelli (North Island brown kiwi): 106494754
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Entry
106494754 CDS
T04298
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specific factor 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106494754 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aam03021
]
106494754 (CPSF3)
03019 Messenger RNA biogenesis [BR:
aam03019
]
106494754 (CPSF3)
Transcription machinery [BR:
aam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106494754 (CPSF3)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106494754 (CPSF3)
U7-dependent histone pre-mRNA processing factors
106494754 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
106494754
NCBI-ProteinID:
XP_013810522
UniProt:
A0A8B7JHI1
LinkDB
All DBs
Position
Un
AA seq
691 aa
AA seq
DB search
MSAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKL
TGDVEEVEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAVVHKISKKVDMDVYSKRMEIMLQDMFGEDCVSSKDGSVLCVTVDGKTANISLDTRTV
ECEPGSEDDESLREMVELAAQRLYDALSPVH
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaagcggaaggctgaggcgctgatcccggcggaggagagcgatcagctgctt
atccggccgctaggtgctggccaagaagtaggaagatcatgcattattctggagtttaaa
ggaagaaaaataatgcttgattgtggaatccaccctggattggaaggaatggatgctctt
ccttacattgatttgatcgatcctgctgagattgatcttctcctaattagccatttccat
ttagatcattgtggggctttaccatggtttttgcagaaaacaagtttcaaaggaagaaca
ttcatgacgcatgccacaaaagctatttacagatggcttctttcagactatgtcaaagtc
agtaatatatcagcggatgacatgctatatacagaaacggacctggaagaaagcatggac
aagattgaaactatcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgt
taccatgcaggccatgtcctgggagctgccatgtttatgattgaaatagctggcgtgaag
cttttatatacaggtgatttctcaagacaggaagacaggcatttgatggcagctgagatt
cccaatattaaacctgatattcttataattgaatccacctatggtactcacattcatgaa
aaaagggaagagcgagaggcaagattctgtaataccgttcatgacattgtaaatagagga
ggtagaggtcttattcctgtgtttgccctaggtcgagctcaagaactgcttttaatttta
gatgaatactggcagaatcatcctgaactccatgatattcctatatactatgcgtcctct
ttggcaaagaaatgcatggcagtttatcagacatatgtcaatgccatgaacgacaaaatc
cgcaagcaaataaacatcaacaatccgtttgttttcaagcatattagtaatctgaagagt
atggatcactttgatgatatcggcccaagtgttgtgatggcttcgccgggtatgatgcag
agtggcttgtctagagagttgtttgagagctggtgcacagacaagagaaacggagtaatt
attgcagggtactgtgttgaaggaacacttgctaagcacatcatgtctgaacctgaagaa
atcacaactatgtcagggcaaaaactcccactgaagatgtctgtagactacatttctttc
tctgctcacacagattatcaacaaactagtgagtttattcgggccctgaaacctccacat
gtgattttagttcatggagagcagaatgaaatggccaggttgaaagcagcattgatacga
gaatatgaggataatgatgaagttcatatagaagttcataatcctaggaatactgaagcc
gtgacattgaacttcagaggagaaaaacttgctaaggtgatgggatctttagcagataag
aagccagagcaaggacagagaatttctggaatcctggttaaaagaaattttaactatcat
atcctttctccttgtgacctctccaattacacagacttggcgatgagcactgtaacacag
acacaagccattccatatacgggccctttcaatctgctttattatcagctacaaaaactt
actggtgatgtagaagaagtagaaatccaacaaaaaccagccttgaaggttttcaaaaat
attactgtgatccaggaaccaggcatggtagtgcttgagtgggtggcaaatcctgctaat
gatatgtatgcagacaccgtgacaacagtgatactggaagttcaatcaaatcccaaaata
caaaaagctgtggtacataaaatttccaaaaaagtagatatggatgtgtatagcaagagg
atggagatcatgcttcaggacatgtttggggaagactgtgtaagttcaaaagatggctct
gtcctatgtgtcacagtagatggaaagactgcaaacatttcactggacactcggacggtt
gaatgcgagccaggaagtgaagatgacgaatcccttcgggaaatggtggaactggctgca
cagaggctctatgatgccctcagtccagtacactga
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