Apteryx mantelli mantelli (North Island brown kiwi): 106494756
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Entry
106494756 CDS
T04298
Symbol
DDX1
Name
(RefSeq) DEAD-box helicase 1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aam03041
]
106494756 (DDX1)
03016 Transfer RNA biogenesis [BR:
aam03016
]
106494756 (DDX1)
Enzymes [BR:
aam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106494756 (DDX1)
Spliceosome [BR:
aam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106494756 (DDX1)
Transfer RNA biogenesis [BR:
aam03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
106494756 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
106494756
NCBI-ProteinID:
XP_013810525
UniProt:
A0A8B7JHH9
LinkDB
All DBs
Position
Un
AA seq
734 aa
AA seq
DB search
MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE
TLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATR
GVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEF
TMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPQHIRNQALFAACVLKNAELKFNFGEED
FKFPPKDGYIALCKAPDGSVVKSQHTGNAQVVQTQNLPNAPKALIVEPSRELAEQTLNNV
KQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLNLSQVRF
LVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP
TWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGANTPEMWS
EAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQFSCVCLH
GDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV
GRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHL
NCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEKEAQTSF
LHLGYLPNQLFRTF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttatgccggagatagctcaagcagtggaggagatggactggcttctccccaca
gatattcaagcagagtctattccactgattctaggaggcggtgatgtgcttatggctgca
gaaacagggagtggaaaaactggtgcttttagcattccagttatccagatagtttatgaa
acattaaaggaccagatggaaggcaagaaagggaaagcaaccattaaaactggtggagca
gtgctcaataaatggcaaatgaacccatatgatagaggatcagcttttgcaattggatca
gacggtctatgttgtcaaagcagagaggtaaaagaatggcatggatgcagagcaactaga
ggcgtgactaaaggaaaatactactatgaagtttcctgtcatgaccaagggttgtgcaga
gttggctggtcaactatgcaggcttcgttagacttgggcactgataaatttggctttggc
tttggtgggaccggcaagaaatctcacaacaagcaatttgacagctacggtgaggaattc
actatgcatgatacaattggatgttatctagacatagataaaggacaaataaaattttcc
aaaaatgggaaagaccttggccttgcatttgaaatcccacagcacatacggaaccaagca
ctctttgctgcttgtgtactgaagaatgctgaattgaaattcaattttggtgaagaagac
ttcaagtttccaccaaaagatggctatattgccctttgcaaagctcctgatggtagtgtt
gtaaaatcacaacacacgggaaatgcacaagtggttcaaacacagaaccttccaaatgct
ccaaaagcattgattgtagaaccatcgagagagctggcagaacaaactttaaacaatgtg
aagcagttcaaaaaatatgttgataatcccaagttaagagagctgctgattattggtggt
gttgctgcaagagatcaactctctgtgctggaacaaggagtggacatagttgtgggaacc
cctggaagactggatgacctggtctcaacaggaaagcttaacctatctcaagttagattc
ctggttctggatgaagctgatgggctgcttctccaaggttattcagacttcataaacagg
attcacagtcagattcctcagataacttcagatggaaagagacttcaggtgattgtgtgc
tctgcaacattgcattcttttgatgtgaaaaaactgtctgaaaagatcatgcattttccc
acctgggttgacttgaaaggagaagattctgtccctgaaactgtgcaccatgtagttgtg
cctgtaaatccaaaagctgacaaactctgggaaaggcttggcaagaatcacataagaact
gatgaagtacatgcaaaagataatacacgacctggtgctaacactccagaaatgtggtct
gaagctattaaaattctgaaaggagagtacactgttcgggcgatcaaagaacacaagatg
gaccaagccattattttctgtaggacgaaaatagattgtgataatatggagcaatacttc
atccaacagggtggaggccctgataggaagggacatcagttctcatgtgtctgtctgcat
ggtgacagaaaacctcaagaaagaaagcaaaacttggaaagatttaagagaggagatgtc
cgtttcttgatctgcacagatgttgctgctagaggaatcgatattcatggtgttccatat
gttatcaacgtcacactccctgatgaaaaacagaactatgttcatcgaattgggagagta
ggcagagctgaaaggatgggtctggcaatctcccttgtggcaaaagaaaaagaaaaggtt
tggtatcatgtatgcagtagccgtggaaaaggatgttataacactagactgaaggaagaa
ggaggctgtaccatttggtacaatgagatgcagttgctgggggagattgaagaacactta
aactgcactattgcccaggttgaaccagacataaaagtaccagtggatgattttgatggg
aaggttacttatgggcaaaaaagagctctgggtggtggactctataaaggccacgtggat
atcttggcacctacggtacaagagttggctgcccttgaaaaggaagctcagacttctttc
ttgcatcttggctaccttcctaaccagctcttcagaacattctga
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