Apteryx mantelli mantelli (North Island brown kiwi): 106494796
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Entry
106494796 CDS
T04298
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting 13 homolog A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aam04131
]
106494796 (VPS13A)
Membrane trafficking [BR:
aam04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106494796 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
Ribosomal_L14e
Motif
Other DBs
NCBI-GeneID:
106494796
NCBI-ProteinID:
XP_013810570
UniProt:
A0A8B7JHM5
LinkDB
All DBs
Position
Un
AA seq
2099 aa
AA seq
DB search
MKNGEELFRWSPLPSPSQLLYGIVKTIMFETVLMPFVLSASMMCLVLPVGFLXLEIKENA
LSQLDVPFKVKAGHISQLNLQIPWQNLYTQPVEAVLDGVYLLIVPTASIKYDAEKEARQL
LEARQRELQRIEEAKQKIADQDKVKEEKQDSFVEKLVTQVIKNLQVKISNIHVRYEDDVS
TFVYFNVQEXFSLIFFQTSDKNWNPCLHDETAKLFYKLVRLDNLFAYWNVKSEMFYHGGY
DESLVNLKQGVACHNVIPEGYDFVFRPISAKAKLLMNPRSDVDFSTPKMDLDVNLQDIAV
EFNKPQYFSVMELLESIDMMTRNLPYRKYRPDVPLHNNARTWWKYVIYGILEVNVQPKLQ
MWSWERIQHHRKQVKNYKEMYKTKITSKKPNEEILKLLEEFEKALDIFNITLARQQAEVE
ATKAGLKLYRPGVKQDDENSGGWFSWIWGWSGEKKDEQKQEVKGSSLEELMTLEEKAKLY
AAIGYSETAVDPTLPKSYEAMKLSVKLLSMSISIRENEQTPELVKFALIDLSTVFTQRPG
AQAIRFETKISSLEVTGMSQEKCTPCLLSSRTVYSDNSTSLLSIMFETNPLDEKADQRLR
IESQPLEIIYDARTVNNLVDFFRPPKDVHLEQLTSATLMKLEEFREKTSTGLLYVIETQK
VLDLKINLMASYIIVPQKGFYDCTSNLLLLDLGSLKMKSKSRSDLSELKVGQSTIEDIMS
RAYDSFDIQLSSIQLLYSKHDENWQEARKLKYSSQHILQPLDVKVEFSRAMVVTDARMPR
FKMSGQLPLLSIQVSDQKLTSILELIDSIPKPESTPATGSPPKISEAAISPVLSAPHLSQ
GVLPVLDLHSLAESESEEEFYDALSSPVEDMPFFEASCGSLKRGNSTRRQKLRKQESRKN
MTDFQLRFEVAEVLIKLCRLTDNIETPVLQLEVVGLGTELKLRTFDMTANAFLREVCLLC
PEYMDDNDKPVYIITTLDNVEDDLLTLEYIKADINGPELKTAYQNVLQKIKVNFSSLDVH
LHTETLLNAMNYLNSLLPKQETKVAEEPVQEKVEEKKDVLKKLSEFIYFFFLSYSFLSKA
LYITGKEVFNFRMISYVNATDGIAYTNMDVVDSRIYLTVGCIQVVFVNKFVSSILAFINN
FQAAKAAVTEATVQAAEKAATGVKELAERSSRLSLDINIKAPVVIVPQSAMSANVLVADL
GLITVKNRFIIAKTKTRYTLPPVIDSMTVKLSELKLYRSYYESGSLQTEVQLLQPLNLEV
IVERNLAAAWYSEVPDIEISGRLKPMNLILSQEDITTILRTLNENIGGSSGAPPPLPEPK
DTNSHCSDAHSTSQHSAGVTVVTSAVVELHSPIKIKTTLKLDFRFDSLTLVLYSPNSKQA
AVMDQRDDLLKLAEFKLVLMSAAVKMLSDGSMNASVKLANCTLDDKRQSIQKATPRMVEM
KHGFEKKFMVDISYKQGRDGTLLDMIVQEIYLCASMEFLLTVADIFLKANAESAAAQRNL
KQSLPLKDQAPLQPVSTMEMNIIVKNPEIVFVADLTRSDAPALVVTTQCEVFIKNSPEKY
SMTAAVKEIQMKACPFLPEKRKGNIITVLQPCDFFFEMKQSGTNPQFADLTIKSLTXXVS
PIIINTVITITSALSPTTETTEEEISQIPPDLWNKKDIKNLKMWFLEESNENEDINPTTE
LVPTGETLKMNIESVIITLEAGVGHRTVPMLLAKSSFLGEVKNWSTLINLHSRLELEVHY
FNEMFGVWEPLLEPLEIEKTDLFKPWILEIKMKKKAKKALVESDAEEENYKVPEYKTVIH
VSSKDQLNITLSKCGLLMLSNLGTAFAEAASQTSDIFKKDRAPFVIMNSLGLPITVSPSD
SFSVINIEFGAKIFHLKDGENLNMEYVRTKNESDQFTAMTTLSSKRFYIQICPHNHSTVE
KIPLTKVGRCLYTVRHEESGVERSIVCQIDTVEGSKMITIRSPIQIRNHFSIPLNIFEEG
RCLGTALPENEFNIPLSSYRSILSLQPLANENAVDGEYDMCEGITFDEIMKNVDSLLQRK
CQSVKSTNYSFVINIVPVKDTLTSSLCADDQWDFPYVVHLWPSVLLRNLLPYQITYSVE
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatggtgaagaattatttcgatggtcccccttgccttccccatcccagctctta
tatggaattgtcaaaaccatcatgttcgaaacagtgttgatgccatttgtgctcagtgcc
agcatgatgtgcctagttttacctgttggcttcttgnatcttgaaataaaagaaaatgcg
ctgagtcagctggatgtgccatttaaagttaaagcaggacatattagtcaacttaaccta
cagattccatggcaaaacctttatacacaacctgttgaggcagttcttgatggagtttat
ttgcttatcgtgccgacagccagcataaaatatgatgcagaaaaagaagccagacagctc
ttggaagcaaggcaaagagaactgcaaagaatagaggaagcaaagcagaaaatagctgac
caagataaagtaaaagaagagaaacaagacagttttgttgaaaaattagtcactcaggtc
atcaaaaatcttcaggttaaaatttccaacatccatgttcgctatgaagacgatgtaagt
acttttgtgtattttaacgtacaggaataattttccttaattttttttcagacctcagat
aagaactggaatccgtgtttacatgatgaaactgccaagttgttctacaagcttgtacga
ctggataatctttttgcatattggaatgtgaaatctgagatgttctatcatggcggttat
gatgaatctttggttaacttaaaacagggagttgcctgccacaatgtgatcccagagggt
tatgattttgtattccgcccaatttcagctaaagccaaactccttatgaatcctcgatca
gacgttgacttttcaacaccgaaaatggatttagatgtaaatttacaggatatagctgtt
gaattcaataagccacagtacttcagtgttatggagctccttgaatctattgatatgatg
actcgaaatctgccatataggaagtacagacctgatgttccattgcacaacaatgccagg
acatggtggaaatatgttatttatggcatccttgaagtaaatgttcaacctaagctccaa
atgtggtcatgggaacgtattcagcaccataggaaacaagtgaagaactacaaagagatg
tataaaacaaagataacatcaaaaaaacccaatgaagaaatcttaaaattgttggaggaa
tttgaaaaggccttggatattttcaacatcacgctagcaaggcaacaagcagaagttgag
gcaactaaagctggattaaaactttacagaccaggagtaaaacaagatgatgaaaattct
ggtggctggtttagctggatatggggctggtcaggtgaaaaaaaggacgaacagaaacaa
gaagtaaagggttcaagtcttgaagagctaatgacacttgaagagaaggctaaactttat
gcagcaataggatatagcgaaacagctgtggatccaacacttccaaaatcatatgaagcc
atgaagttatctgtgaagttattaagtatgtctatatcaataagagaaaatgagcaaaca
cctgagctggtaaaatttgcattaattgatttgagtacagtatttacccaaagacctggt
gcacaagcaataagatttgaaacaaaaataagttcacttgaagttacaggcatgtcacag
gagaaatgtacaccctgtctgctgtcttctcgaacagtctattcagataatagtacctca
ctcttgagcataatgtttgagactaatcctttagatgaaaaagcagatcagaggcttaga
atagaatcacagccattggaaataatatatgatgcaaggacagtaaataatttagtggat
ttcttcaggcctccaaaagatgtacatttggagcagttgacctcagcaactctgatgaag
cttgaagagtttcgtgagaaaacatcaacaggtttgttgtatgttattgaaacccagaaa
gttcttgacctcaaaattaacctcatggcttcatacatcattgttccacaaaaaggattc
tatgactgtacatcaaacttactgcttttggatcttggtagtcttaagatgaaaagtaaa
agtcgttctgatttatcagaactaaaagtaggacaaagcactattgaagatataatgtca
agagcttatgacagttttgatatccagctcagcagcatacagttactctacagcaaacat
gatgaaaactggcaagaggctcgcaagctgaaatactcatctcaacatatcttgcagccc
ttggatgtaaaagtggaattcagcagggctatggttgtcacagatgcaagaatgcccagg
ttcaaaatgtctggacagcttcctttactttctatccaagtatcagaccaaaagttgaca
agtatcttggaactaattgacagcattccgaaaccagaaagtactcctgctacaggttct
cccccaaagatatctgaggctgcaatatcccctgtgctgtcagcaccacatttatcacaa
ggtgtgcttcctgttttggatcttcattcacttgctgagtcagaatccgaagaagaattt
tatgatgctctaagcagtcctgtggaagacatgccattttttgaagcctcgtgtggttcc
ctcaagcgaggtaacagtacaagacgacaaaaattacgtaaacaagaatctaggaagaat
atgacagatttccagctaagatttgaagtagctgaggtcttaattaaattatgtcgtctt
actgataatattgagacacctgtgctgcagcttgaagttgtagggttaggcactgaactc
aaattaagaacatttgacatgactgcaaatgctttccttcgtgaagtttgcctactgtgt
ccagaatatatggatgataatgacaaaccagtttatatcattactactttggataatgta
gaggatgatcttctcactctggaatacataaaggctgatattaatggaccagaactgaaa
actgcctatcagaatgttctacagaaaataaaggtgaacttttcttctcttgatgttcat
ttgcataccgaaactctcctaaatgccatgaactatctgaacagtctcctaccgaaacaa
gaaactaaagttgcagaagaaccagtccaggaaaaagtagaggagaagaaggatgtactt
aagaaattaagtgagtttatttacttctttttcctctcgtactcctttctttctaaggct
ctgtacatcactggaaaagaagtcttcaactttagaatgatatcctatgtgaacgctaca
gatggtattgcatatacaaatatggatgttgttgacagtcgtatttacctaactgttggg
tgcattcaagtagtttttgtcaacaagtttgtttcctctattttggcttttataaataac
tttcaagctgccaaggcagcagttactgaggcaactgttcaagcagcagagaaagcagct
acaggtgtaaaagaactggcagaacgtagttcccgattgtcactagatatcaatattaaa
gcaccagttgtgatagttccacaatcagcaatgtctgctaatgtcctggtggctgatctt
ggtctaatcactgtaaagaaccgattcattattgctaaaacaaaaacacgatatactctc
ccgcctgttattgactctatgacagtgaaattgagtgaactaaagttatacagatcgtac
tatgagagtggttcattgcaaactgaagtacagctgctgcagccactaaatctggaagtt
attgttgaacgaaatttagctgctgcatggtatagtgaagttcctgatattgaaatatct
ggacgactcaagcctatgaatctgatcctcagtcaggaggacataaccacaatattgaga
acactaaatgaaaatataggcgggagctctggtgcaccaccacctttaccagaaccaaaa
gatacaaatagccattgtagtgatgcacatagtacttcacagcactctgcaggtgtgact
gttgtgacatcagctgttgtggaattgcattcacctattaaaattaaaacaacgctaaaa
ctggatttcagatttgactctctgactttggtactgtatagtccaaattcaaaacaggct
gcagttatggatcaaagagatgatcttttgaagcttgcagaatttaaattagttttgatg
tcagctgctgtcaaaatgttatcagatggttcaatgaatgcttcagtcaagttagcaaac
tgtacattagatgataaaagacagtcaatccagaaggctacaccaaggatggtggaaatg
aaacatgggtttgaaaagaaatttatggtggatataagctataagcaggggagagatggc
actcttcttgacatgattgttcaagagatatacctatgtgcaagcatggaatttctactt
actgttgcagatatattcctaaaggctaatgcagaaagtgctgctgcacagagaaatctc
aaacaatctttacctttaaaggatcaagcacctttgcagcctgtgtctacaatggaaatg
aatattattgttaaaaatccagagattgtgtttgtggccgatttaacgagaagtgatgct
cctgcgttggtggttacaactcagtgtgaggtcttcattaaaaatagccctgaaaagtat
agcatgacagctgctgttaaagagatacaaatgaaagcatgcccttttctcccagaaaaa
agaaaagggaacattattacggtattacagccttgtgatttcttctttgaaatgaagcag
tcgggtactaatccgcagtttgctgatctaacgattaaatctctaacnnnnnaggtttca
ccaataatcataaatacagtgattaccattacatcagccctttctccaactacagaaacg
acagaggaagagatcagtcaaattcctccagacttgtggaataagaaagatataaaaaat
ctaaaaatgtggtttcttgaagaatcaaatgaaaacgaagatataaatccaaccactgaa
ctggttcccacaggagagacattgaaaatgaatattgaatcggtcattataacacttgaa
gctggggttggtcaccgaactgtaccaatgctcttagcaaagtcatcatttctgggagaa
gtaaaaaactggagtactcttatcaacctacattctcggcttgagctagaggtacactat
tttaatgagatgtttggggtgtgggaacctttacttgaaccactagaaattgagaagact
gatttattcaaaccatggattcttgaaatcaagatgaaaaagaaggctaaaaaagcatta
gttgaatcagatgcagaagaagagaactacaaagtcccagaatataaaacagtaatacat
gtttcctcaaaagaccagctgaatattacactatccaaatgtgggctactaatgttgagt
aacttaggcacggcatttgctgaagcagctagccaaacttcagacatcttcaaaaaagac
agagcaccttttgtaataatgaattctttaggacttcctatcactgtctcacctagtgat
tcctttagtgtcattaacattgaatttggagcaaaaatatttcatttaaaagatggagaa
aatttaaacatggaatatgtcagaactaaaaacgagagtgaccaattcacagcaatgaca
actctgagtagcaaaaggttttacattcaaatttgtccacataatcattctactgtggaa
aagattccattgacaaaagtaggccgatgtctttacactgtaagacacgaggaatcgggt
gttgaaaggtccattgtctgccaaattgatactgttgaaggaagcaagatgataactata
cgttctccgatccagataaggaatcacttttcaattccattaaatatttttgaggaagga
agatgtttaggaactgctttaccagaaaatgaattcaacatacccttgtcctcttacaga
tccatactgagtttgcaacccctagccaatgaaaatgcagtggatggagaatatgatatg
tgtgaaggaattacatttgatgaaattatgaaaaatgttgacagcttattgcagaggaaa
tgccagtcagtgaagtcaactaactactcatttgtcatcaatattgtcccagtaaaggac
acattgacatcttcattatgtgcggatgaccagtgggattttccatatgttgtgcattta
tggccttctgttcttctccgcaatcttcttccatatcaaataacttattctgttgag
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integrated database retrieval system
