Apteryx mantelli mantelli (North Island brown kiwi): 106495586
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Entry
106495586 CDS
T04298
Symbol
LSM4
Name
(RefSeq) LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03018
RNA degradation
aam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106495586 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
106495586 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106495586 (LSM4)
03041 Spliceosome [BR:
aam03041
]
106495586 (LSM4)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106495586 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
106495586 (LSM4)
Spliceosome [BR:
aam03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106495586 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
106495586
NCBI-ProteinID:
XP_013811546
UniProt:
A0A8B7JKH2
LinkDB
All DBs
Position
Un
AA seq
138 aa
AA seq
DB search
MGFFRPLPGDSRLFQLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGVGGAGRGVFGGRGRGIP
GSGRGQQEKKPGRQSAKQ
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgggcttctttcggccgctgcccggtgactcccgtctcttccagctggtggagctgaaa
aacggcgagacttacaacgggcacctggtgagctgcgacaactggatgaacatcaacctg
cgggaagtcatctgcacgtcccgggatggtgacaagttctggagaatgcccgagtgttac
attcgtggcagcacgatcaaatacctgcgtatccctgatgaaataattgacatggtgaaa
gaagaggtggtgtcgaagggcagaggtcgcggcgggatgcagcagcagaaacagcagaag
ggccgtggagttggaggtgctggacgaggtgtgtttggcggccgtggccgaggaatacca
ggcagcggaagaggccagcaggaaaaaaagccaggcagacaatcggcaaagcaatga
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integrated database retrieval system
