Apteryx mantelli mantelli (North Island brown kiwi): 106495775
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Entry
106495775 CDS
T04298
Symbol
SMG7
Name
(RefSeq) SMG7, nonsense mediated mRNA decay factor
KO
K14409
protein SMG7
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106495775 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106495775 (SMG7)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106495775 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
106495775 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
106495775
NCBI-ProteinID:
XP_013811773
UniProt:
A0A8B7JPC0
LinkDB
All DBs
Position
Un
AA seq
1190 aa
AA seq
DB search
MGLKSEIPLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYP
LPAVKVSMDWLKLRPSVFQEAVVDERRIWPWLISLLNSFQPHEEDLSNSNATPLPEEFEL
QGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVG
KLLFLTEIPELLLEDPSEAKESLALQETSIAEPLSTDGSPGLKSVLSTGRSLNNNCDAGE
KPMVTFKENIKPREVNREQGRIYPPKDVGRERRDYSKGIVANKNDGKKDNNKRKNETKKC
GLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPL
PSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPY
SQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAVQ
GLGKSPPHHSGFQQYPQTDSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQ
PPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSSMDRRGKRQ
GVFRPEQDAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASL
PGRSLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVTP
SVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSN
FGPIGTPDNRDRRIADRWKTDKPAMGGFGLDYLPATSSSSESSWHQSSTPSGTWAAQGPP
MEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgggactcaaatcagagatacccttgaggcaggctgaagtcctgaaggctgacatgaca
gattcgaagctgggtccagcagaagtctggacgtccagacaggctctgcaggacttgtat
cagaaaatgctagtgactgatttggaatatgctttagataaaaaggtggagcaagacctt
tggaatcatgcctttaaaaatcagatcactacactacagggtcaagcgaaaaatagagca
aatccaaatcggagtgaagttcaggcgaacctttctctgttcttagaggcagctagtggc
ttctacacacagttattacaggaattgtgcacagtttttaatgtagacttgccatgtcgt
gtgaagtcttcccagctgggaatcattagcaataaacagacgcacaccagcgccattgtg
aagccgcaatctagctcctgctcttacatctgccagcactgccttgtccaccttggagat
atcgctcgctacaggaatcagaccagccaggcagagtcttactacagacatgcagctcag
cttgtcccttccaatggtcagccttataatcagttggctattctagcttcctccaaagga
gaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcctttccca
gctgcctccactaacctacaaaaagcactttctaaagcactggagagtcgtgatgaggtg
aagactcgatggagcgtgtctgacttcatcaaggcatttattaaattccatggtcatgtg
tacctgagtaagagcttggagaagctgagccctcttcgagaaaagctggaagaacagttc
aagaggttgttattccaaaaggccttcaattctcagcagttagtacatattactgttatc
aacctgttccaactgcatcacctgcgagacttcagcaacgaaacggagcagcacagttac
agccaggatgagcagctctgctggacgcagttactggcgctcttcatgtcctttcttgga
gttctgtgcaagtgtcctttacaaaacgactaccaggaggactctggggctgcatatcct
cttccagctgtgaaggtttcaatggactggctgaaacttagacccagtgttttccaggag
gcagtagttgatgaaagacgcatatggccctggctgatttctcttctaaacagcttccag
ccccatgaagaagatctctccaatagtaacgcaaccccccttccagaagaatttgagttg
caaggattcttggctctgagaccctcgttcaggaacttggatttttcaaaaggccaccag
gcaattacaggagataaggaagggcaacaacgtaggatacggcaacagcgtctgatcttc
acaggcaaatggattgctgataaccagccaaggttgattcagtgtgaaaatgaggtagga
aagctgttgtttttgacggaaatcccggaattattactagaggaccctagtgaagccaaa
gagagtctcgccttgcaggaaacatcaattgcagagccactatccacagatgggagccct
ggactcaaatcggttctgtccactggcagaagtctaaacaacaactgtgatgcaggagaa
aaaccaatggtcacattcaaagagaacattaagccccgggaagtaaacagagagcaagga
cgaatctatccacctaaagatgtgggtagggaaagaagggactatagcaaaggaatagta
gccaataagaatgatggaaagaaggataacaataaaagaaagaacgagaccaagaagtgc
ggcttggataagatgcaggaagcaggaaagcagaacgtggcagttcaggtgaaatcccag
accgagatgaggaagactccagtgtctgaagccaggaaaacacctgtaactcagactcca
agtcaggccagcagttcccagttcatccccattcatcacccaggagccttccctcccctg
ccaagccggccaggattcccacctccgacgtacgttgtccccccacctgtggctttctcc
atgagcacggggtacaccttcccaggcggcgtttccgtcccaggaaccttcctccagccc
acagctcactcgcctgcaggaaaccaggtgcaagctgggaagcagtcccacattccttat
agccagcaacggccctctggaccagggcccatgacccagggacctcagcaaacaccacct
ccctcccagcaacccctctcatcgttaccagctcaggcaacagcacagtctgcgagccag
ttacaggtgcaagcgctggcccagcagcagcagcaacagtcccctacaaaagctgtgcag
ggcctggggaagagcccaccgcaccactctggattccagcagtacccccagacagactca
tcaaagcagctctggaaccctcctcaagtccaaggctcgctggggaagatcatgcctgta
aagcagtcctattaccttcaggcccaggaccctctaaaattatttgaacagtcattacag
cctcctgtgatgcaacagcagcctctggagaaaaaaatgaagccttttccaatggagcca
tataaccagaacccctcagaagtcaaggtgccagaatattactgggactcttcctatggc
atggctgataacagagtgatggcacagcagtctagcatggaccgcaggggaaaacggcaa
ggagtcttccgcccagaacaggatgctgtctccaggatgacctttgaggaccccaagagc
tcccctctgcttcctccggacctgttaaagagtctggctgccttggaggaggaggaagag
ctgattttctctaatcctcctgatctttacccagctctgctggggcctctcgcctctctt
cctgggcgaagcctctttaagtccttgctggaaaaaccatcagaattgatgtctcagtca
tcttctttcctgtccctcagtggcttttcccttaatcaggaaagatacccaaataacagc
atgttcaatgaggtatatgggaaaaacatgaataccagcacaaaaacagaagtcacccct
tcagtcgcccatcaggagacttcactctattctctctttgaagggactccgtggtctcca
tcccttccagccagctcagatcattcgacaccagccagccagtctcctcactcctccaac
cccagcagcttgccaagctcccctccaacccataaccacaattctgttcccttctccaac
ttcggacctattgggactccagacaacagagacaggagaatcgcagaccgctggaaaaca
gataagccagcaatgggaggatttggtctggactatctcccagcaacatcgtcatcttca
gagagcagctggcaccagtccagcactcccagtggcacctgggcagcccagggtccccct
atggaggactcctcagctgtgcttatggagagcctgaagtccatctggtccagttccatg
atgcatcctggcccttcagctctggagcagctgttaatgcagcagaagcagaagcagcag
cgtggacaaggcaccatgaacccgccgcattga
DBGET
integrated database retrieval system
