Apteryx mantelli mantelli (North Island brown kiwi): 106495852
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Entry
106495852 CDS
T04298
Symbol
POLR2B
Name
(RefSeq) RNA polymerase II subunit B
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03020
RNA polymerase
aam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106495852 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
106495852 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aam03021
]
106495852 (POLR2B)
03400 DNA repair and recombination proteins [BR:
aam03400
]
106495852 (POLR2B)
Enzymes [BR:
aam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106495852 (POLR2B)
Transcription machinery [BR:
aam03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106495852 (POLR2B)
DNA repair and recombination proteins [BR:
aam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106495852 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
106495852
NCBI-ProteinID:
XP_013811863
UniProt:
A0A8B7JPK2
LinkDB
All DBs
Position
Un
AA seq
1122 aa
AA seq
DB search
MSVQRIVEDAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNE
ARLRNLTYSAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLC
ELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPT
STIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDF
EDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVG
VSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLL
KEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNR
LTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYI
SVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRR
QMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYS
WQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFREL
PAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKP
TRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDC
STFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQE
DMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKIS
NLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNR
QPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRT
HTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcagagaattgttgaagacgctccaccaattgatttacaagctgaagcccag
catgccacaggagaagtggaagagccaccccggtatctgctgaagtttgaacaaatctat
ctctccaaaccaacgcattgggaaagagatggcgcaccgtcccccatgatgcccaacgaa
gccaggctgagaaacctcacgtattcagcccctctgtacgtggatataactaaaacagtc
attaaagagggggaagaccagttacagacacagcatcagaaaacttttataggaaaaatc
cctattatgttacgttcaacatactgcttgttgaatggcttaactgaccgtgatctttgc
gaactgaatgaatgccctcttgaccctggcggctactttatcattaatggatcagaaaag
gttctgatcgctcaggagaaaatggctacaaacacagtgtatgtgtttgcaaagaaagat
tcaaaatatgcctacacaggagagtgtagatcttgtctggagaattcctctcgaccaacc
agtactatatgggttagcatgctggccagaggcgggcagggtgcaaagaagagtgctatt
ggccagcgcattgtggcaactttgccgtatatcaaacaggaagtgcccatcataattgtc
tttcgtgcgctaggctttgtgtccgacagggatattttagagcacatcatttatgatttt
gaagatccagaaatgatggaaatggtcaaaccttctttggatgaagcatttgtcatccag
gaacaaaatgtcgctctgaacttcattggatcaagaggtgcaaagccaggtgtcaccaaa
gagaaaagaatcaagtatgctaaagaagtcttgcagaaagaaatgctcccacatgttggt
gtcagcgacttctgtgaaaccaaaaaggcctattttctagggtatatggttcatagattg
ttgctggcagcactgggaagaagagagcttgatgacagagatcattatggcaacaaaaga
ctggatcttgctgggccactgttagctttcctgttcagaggaatgtttaaaaatttgctg
aaggaagtgagaatatatgcacaaaagtttattgacagagggaaagatttcaacttggaa
ctggcaattaaaacaagaattatttcagatggattgaagtattcattggcgactggaaac
tggggcgatcagaagaaagctcatcaggccagagcaggagtatctcaggtgttaaaccgt
ctgacttttgcatctacgctgtcccatctgaggcgcctgaattctccaattggtagagac
ggtaaactagcaaagcccagacagctgcacaatacgctgtggggcatggtttgccctgct
gagactccagagggtcatgcagtagggcttgtgaagaacttagccctgatggcttacatt
tctgtggggtctcagccatccccaattttggaattcttggaagagtggagtatggaaaat
ctggaagaaatatctccagcagcaatagctgatgctaccaagatttttgttaatggctgc
tgggtaggaatacacaaagatccggaacaacttatgaatacgctaagaaagctgcgtcgt
cagatggacatcattgtgtcggaggtctcaatgattagggatatccgggagcgagaaatc
cgcatctatacggatgcaggcagaatttgccgaccccttttaattgtggaaaaacagaag
ttgctgttgaagaaaaggcatattgaccaactgaaggagcgagagtataacaattacagc
tggcaggatcttgtggccagtggtgtagtggagtatattgataccctggaagaagagact
gtgatgctggcgatgactccggatgacttgcaagagaaaggtgtcgcgtattgttcaacg
tacacacactgtgagattcacccatctatgatcctgggagtatgtgcatctatcatccct
ttccctgatcacaaccagtctcctaggaacacataccaatctgctatgggtaaacaggct
atgggagtttacattacgaacttccatgttcgtatggatacgctggcccatgtgctgtat
tatcctcagaagccccttgtaacaactcgttctatggagtacttgcgatttcgagagtta
ccagcaggtatcaactcgattgtagccattgcatcgtacacaggctataaccaggaagac
tctgtcatcatgaaccgttctgctgtggatagaggctttttcagatctgtgttctatcgc
tcatacaaagagcaagagtccaaaaaagggtatgaccaagaggaagtttttgaaaagcct
acccgtgaaacttgccaaggcatgagacatgctatctatgacaaacttgatgatgatggt
ttgatagcacctggggtacgtgtgtccggggatgatgtcattattggcaaaacagtaact
ctgccagaaaatgaagatgaactggaaagcaccaacagacgtttcacaaagagagactgc
agcacttttctgcgaactagtgagactggtattgtagatcaggtcatggtaacccttaac
caggaaggatacaagttctgcaaaattcgggtacgctctgtgagaatcccacaaattgga
gataaatttgccagcagacatggtcagaagggaacctgtggaatccagtacaggcaagag
gatatgcccttcacctgtgaaggcatcacacctgatataatcatcaatccccatgccatc
ccttcccgcatgaccattggtcacttgatcgaatgtcttcaggggaaggtatcggcaaac
aagggagaaattggtgatgctacaccttttaatgatgctgtcaacgtgcagaagatttcc
aacctcttatcagattatggctatcatctaagaggaaatgaggtcctctacaatggattc
actggccgaaaaatcacatcacagattttcatcggtcctacttattatcagcgattgaag
cacatggtagatgacaaaatccattctcgtgcaagagggccaatccagatccttaacaga
cagcccatggaaggtagatctcgtgatggtggccttcgctttggagaaatggaacgagat
tgccagatcgctcatggagcagcccagttcttgagagagaggttgtttgaagcttcagac
ccataccaagtccatgtctgtaacctctgtggaatcatggcaattgcaaacacaaggact
cacacctatgaatgccggggatgccgtaacaaaactcagatctctttggttcgaatgccc
tatgcctgcaagctccttttccaagaactgatgtctatgagtattgcgcctcgaatgatg
agtgtttag
DBGET
integrated database retrieval system
