Apteryx mantelli mantelli (North Island brown kiwi): 106496279
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Entry
106496279 CDS
T04298
Symbol
DDX54
Name
(RefSeq) DEAD-box helicase 54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aam03009
]
106496279 (DDX54)
Enzymes [BR:
aam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106496279 (DDX54)
Ribosome biogenesis [BR:
aam03009
]
Eukaryotic type
Pre-60S particles
Helicases
106496279 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DUF6221
Motif
Other DBs
NCBI-GeneID:
106496279
NCBI-ProteinID:
XP_013812361
UniProt:
A0A8B7JMR1
LinkDB
All DBs
Position
Un
AA seq
769 aa
AA seq
DB search
MSPPGLSYPVFKGIMKKGYKVPTPIQRKTIPVILNGKDVVAMARTGSGKTACFLIPMFEK
LKAHSAQTGARALVLSPTRELALQTMKFTKELGKFTGLKTALVLGGDKMEDQFAALHENP
DIIIATPGRLMHVAVEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPESHQTVLF
SATLPKLLVEFARAGLTEPMLIRLDVESKLSEQLKLAFFHVRGDDKPAVLLHLLRSVVKP
QDQTVVFVATKHHTEYLKELLTAQGIHCTHIYSSLDQTARKINIAKFSQGKCPVLLVTDV
AARGLDIPMLDNVINYSFPAKAKLFLHRVGRVARAGRSGTAYSLVAPDEMPYVFDLHLFL
GRPLVLAGAQEMPADASGVLGRVPQSLVDDEECLLLTDHEGSLDLRSLRRVADNAHKQYV
RSRPGPSPESIKRAKDLDVSQLGIHPLFSARFEDTELERLKFVDSIKTYKSKATIFEINA
TARTLASTVMRSKRRRDHALIEKYQRGQQEKQAAALQGQGLCPVLPGSEEKEGEEENLQD
VFSTVVGRKRKQGREGEDGARKKPQQQAQQDEDFYIPYRPKDFESERGLSVGGEGSPFEQ
QAAGAILDLMGDENHNLNKSKQLLKWDRKKKRFVGQTGQEDKKKVRTESGRYISSSYKNN
LYEKWKQKYKVDERDEEEEDERRGEQVRGKHRRGHGTRHPPAQGKVRSELKNKQQILKQR
KAAAKQRFLQRGGLKRLKARNRQRVQELRQMAFGRRAGTTKKGKLRKRM
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccaggcctgagctatcccgtcttcaaagggatcatgaagaagggctacaag
gtgcccacgcccatccagaggaagaccatcccggtgatcctcaatggcaaggatgtggtg
gcgatggcgcggacgggcagcgggaagacagcctgtttcctcatccccatgttcgagaag
ctgaaggcgcacagcgcccagacgggggcccgagccctcgtcctctcgcccacccgcgag
ctggccctgcagaccatgaagttcaccaaggagttgggcaagttcacaggcttgaagaca
gctcttgttctgggaggagacaagatggaggaccagtttgctgcgctgcacgagaacccc
gacataatcatcgccaccccggggcgcctgatgcatgtggcggtggaaatgaatctgaag
ctgcagagcgtggagtacgtggtgttcgacgaggccgacaggctgtttgagatgggcttt
gcagagcagctccaggagatcatcgctcggctccctgagagtcatcagacggtcctcttc
tcggccacactgcccaagctgctcgtggagtttgcccgggctgggctcacggagccgatg
ctgatccgcctggatgtggagtccaagctcagcgagcagctcaagctggctttcttccac
gtacgtggggacgacaaaccggccgtgctgctccacctgctcaggagcgtggtgaagccc
caggaccagacagtcgtctttgtggccaccaagcaccacacggagtatctcaaggagttg
ctgacggcccagggcatccactgcacacacatctacagctcgctggatcaaaccgcccgc
aagatcaacatcgccaagttctcccagggcaagtgcccggtgctgctggttacggacgtg
gctgcccgtgggcttgacatccccatgctggacaatgtcatcaactacagcttccctgcc
aaggccaagctgttcctgcatcgcgttggtcgcgtggcccgagctggccggagcggcact
gcctactcactggtggctcctgatgagatgccgtacgtctttgacctccacctcttcctg
ggacgcccgcttgtcctcgctggtgctcaggagatgcccgccgatgccagcggggtcctg
ggccgcgtcccccagagcctggtggacgacgaggagtgcctgctgctcacggaccacgag
ggctcgctggacctgcggagcctgcgccgcgtcgccgacaacgcccacaagcagtacgtg
cggtcccggcccggcccctcgcccgagtccatcaagagggcaaaggacctggatgtgtcc
cagctgggcatccacccgctcttcagcgctcgcttcgaagacaccgaactggagaggctg
aagtttgtggatagcattaaaacctacaagtcgaaggcaaccatcttcgagatcaatgcc
acagcccggacgttggccagtaccgtgatgcggtcgaagcggcgccgtgaccatgccctc
atcgagaagtaccagcgtgggcagcaggagaagcaggcagcagctctccaagggcagggg
ctgtgcccagtcctccctgggtccgaggagaaggaaggagaggaggaaaacctccaggac
gtgttctccactgtggtgggcaggaagcggaaacagggccgtgagggagaagatggtgct
aggaaaaagccgcagcagcaggcacaacaggacgaggacttctacatcccctaccggccc
aaggactttgagagcgagaggggactgagcgtgggcggcgagggcagccccttcgagcag
caggcagccggagccatcctggatctcatgggcgatgaaaaccacaacctcaacaagagc
aagcaactgctgaagtgggaccgcaagaagaagcgattcgtggggcaaacgggccaggag
gacaagaagaaagtgcggacggagagtgggcgctacatcagcagctcctacaagaacaac
ctctatgaaaagtggaagcagaaatacaaggttgacgagcgggacgaggaagaggaagat
gaaagaaggggcgagcaggtcagggggaagcacagacgagggcacgggacccggcatccc
ccagcccagggcaaggtgcgctcagagctgaagaacaagcagcagatcttgaagcaacgc
aaagccgcggccaagcagcgcttcctgcaacgtggtggcctcaagcgcctgaaggccagg
aaccggcagcgggtgcaggagctgcggcagatggctttcgggcgccgggcgggcaccacc
aagaagggcaagctccggaaaaggatgtag
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integrated database retrieval system
