Apteryx mantelli mantelli (North Island brown kiwi): 106497622
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Entry
106497622 CDS
T04298
Symbol
PDZRN3
Name
(RefSeq) PDZ domain containing ring finger 3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aam04121
]
106497622 (PDZRN3)
Enzymes [BR:
aam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106497622 (PDZRN3)
Ubiquitin system [BR:
aam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
106497622 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Sina_ZnF
Prok-RING_4
PDZ_Tricorn
zf-rbx1
U-box
TRAF3_RING
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
106497622
NCBI-ProteinID:
XP_013814046
UniProt:
A0A8B7JSM3
LinkDB
All DBs
Position
Un
AA seq
1025 aa
AA seq
DB search
MGFELDRFSGDVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVNCQRIS
TKELNHVLPLKSLILKLDIKCDNHARGCEAVVPLQHLGEHAETCDFSPAKCRNRGCRQLW
EYSMPVTIRFAAEPDDGAGLDGGHSISRVTSLFDDCFTGTLDTWSMLLEHVVRGVLPVYT
GREFGSVITPESNVLNTFICFLXGEETKALTLVLHRDSGSLGFNIIGGRPCMDNQDGLSS
EGIFVSKIVDTGPAAKEGGLQIHDRIIEVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRR
TPRTKIFSPSHESQLVDVGTQTDITFEHIMALSKMGSPTPPVSVLDPYLLSEDHPSVHEY
YDPNDYMGGIHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDIGIYVSEIDPNS
IAAKDGRLQEGDRIIQINGIEVQNREEAVALLTSEDSKNISLLVARPEIQLDEGWMDDDR
NDFLDDLHMDMLEEQHHQAMQFTASMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDD
STRNDESSEQENNADDHTTSSNTLGSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFL
GIPVDECERFRELLELKCQVKSANPYNLYYHNSTLDMSKSDQESVDRELEMLNEELRNIE
LECLNIVRAHKMQQLKEQYREPWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSS
AYNTGESCRSTPLTLEISPDNSLRRTAEGINCQGNEGVVVHNASQKNLFPSSESHESSVG
KCHSSPKDPDLSKQLESKDRKASDGNRSPTNGQKPSGSYVSPYHHSPYKHAHIPAHAQHY
QSYMQLIQQKSAVEYAQSQMSLVSMCKDFNSSQSEQRMEWKVKVRSDGTRYITKRPVRDR
LLRERAIKIKEERSGMTTDDDAISEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLD
CLKEQQGAEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFL
SVTTV
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagctggatcgcttcagcggggacgtggatcccgacttcaaatgcaatctg
tgcaacaaagttttggaggacccgctcaccaccccttgcggccatgtgttctgcgccggc
tgcgtcctgccctgggtggtgcagcagggcagctgcccggtgaactgccagcggatctcc
accaaggagctcaaccacgtcctgcccttgaagagcctcatcctcaagctggacatcaag
tgcgacaaccacgcgcggggctgcgaggcggtggtgccgctgcagcacctgggcgagcac
gccgagacctgcgacttctcgccggccaagtgccgcaaccgcggctgccgccagctgtgg
gaatacagcatgccagtaaccatcaggtttgctgcagaaccagatgacggggcagggctg
gatggaggccacagcatttccagggttacctcactgtttgatgattgtttcactggaacg
ttagacacgtggagtatgttgttggagcatgtggtccgtggagttcttccagtttacact
ggcagggaatttggctctgttatcacccctgaatctaatgttttgaatacttttatctgt
tttttgtagggtgaagaaactaaagcactgactcttgtccttcatcgtgactctggctct
cttggatttaatattattggtggccgaccatgcatggacaatcaggatggtttgtctagt
gaaggaatttttgtatcgaaaatagttgacactgggcctgctgctaaggaaggagggcta
caaattcatgacaggattattgaggtcaatgggaaggatttatctaaagcaacacatgag
caagcagtggaagctttcaaaacagccaaggaacccattgtggtgcaggtcctgagaaga
actccacgcaccaagatcttcagtccttctcatgagtctcagctggtagacgtgggcaca
cagacagatatcacttttgagcacatcatggctctaagcaagatgggctcacctactcca
cccgtctcagtgctagacccataccttctatctgaagatcatccatcagtgcatgaatac
tatgacccaaatgactacatgggaggaattcatcaagaaatggaccgagatgagttagaa
ttagaggaagtagatttacatagagtgaacagccaggacaagcttggccttactgtatgt
tatagaacggatgatgaagatgacattggtatttacgtgagtgagattgaccccaacagt
attgctgcaaaagatggtcgactccaagagggggatcgcattattcaaattaatggcata
gaagtacagaacagagaagaagctgtggcccttctcaccagcgaagacagcaaaaatatc
tccctacttgttgcaagaccagaaattcagctggatgaaggatggatggatgatgacaga
aatgattttctggatgacttgcacatggacatgttagaggaacagcaccaccaggcaatg
caatttactgccagcatgcttcagcagaagaagcatgaggaagatggaggtaccacagat
acagccactatcttatctaatcagcatgagaaggacagtggcgtagggcgcacagatgat
agcactcggaatgatgaaagctcagagcaggaaaacaacgcagatgatcacaccacttct
tctaacactttagggagccagaagaagctgacatacagccatgacaccctaggaagcggc
gatatgcagttcagcaatgagtcgttcatctcagctgactgcacagacgtcgacttcctt
ggaatccctgtagatgaatgtgaacggttccgggaactgctggaactgaagtgccaagtg
aagtctgccaacccttacaatctgtattatcacaacagcactctggatatgagcaaaagc
gaccaagaaagtgttgacagagagctggagatgctgaatgaggagctccgcaatatcgag
ctcgagtgcctgaatattgtgagagctcataaaatgcagcagctgaaagagcagtaccgg
gagccttggatgctacataacagtgggttccgcaactataatacaagcatcgatgttcgc
aggcatgagctctcagacattacagagctccccgagaagtctgacaaggatagctcaagt
gcatataacacaggagaaagctgccgaagcacaccactcacactggagatttcccctgac
aattcactgcgcagaactgcagaaggcattaactgtcaaggtaatgagggggtagtggta
cataatgcctcccaaaagaatttatttcctagctcagagagtcatgaatccagtgttggt
aaatgccattcctctcctaaagatcctgacctcagcaagcagctggaaagcaaagacaga
aaagccagtgatggaaacagaagcccaactaatggtcaaaagccttctggctcctatgtc
tccccatatcatcactctccatataagcatgctcacatccctgcccatgcacagcactat
cagagctacatgcagctgatccaacagaaatcagccgtggaatatgcacagagccaaatg
agcctggtgagcatgtgcaaagactttaactcaagccagagcgaacagaggatggaatgg
aaagtcaaggtcagaagtgatgggacccgctacattacaaagaggccagtcagggacagg
ttgctgagagaacgtgccataaagattaaggaggagcgcagcggtatgacgactgatgat
gatgccataagtgaaatgaagatgggccgttactggagtaaggaagagcggaagcagcat
ttagtgaaagcaaaggagcagaggagaaggcgtgagtttatgatgcagagcaggctagat
tgtttaaaggaacagcaaggtgcagaagaaaagaaagagatgaatatcattgaactgagc
cacaaaaaaatgatgaagaaaagaaataaaaagatatttgacaattggatgacaatccaa
gaactgttaacccacggaacaaagtcaccggatggcacacgagtgtacaattctttcctg
tcagtgactactgtataa
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integrated database retrieval system
