Apteryx mantelli mantelli (North Island brown kiwi): 106497639
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Entry
106497639 CDS
T04298
Symbol
NDC1
Name
(RefSeq) NDC1 transmembrane nucleoporin
KO
K14315
nucleoporin NDC1
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106497639 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106497639 (NDC1)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106497639 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
106497639
NCBI-ProteinID:
XP_013814062
UniProt:
A0A8B7JVR8
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Position
Un
AA seq
601 aa
AA seq
DB search
MSVVILVISIFNFEFYAVVPSIPCSRLALIGKIIHPQQVIHSVVHAVMGMLVAWCAAVMT
KGKFQFLAVPCTSSESLDDAVPQMCLNEYHLFFLLSGAFMGYSYSLLYLVNNMSYLPFPI
IQQYKYLRFRRSLPLLVKHSCAESLYLVRNFCIAYYFFGYIPRVWISTTMDLHIDSKLHP
LDTLTGLLDLSLLYHTWLCGVFLLITWYIAWLLFKIYATETHHFPVQATFAEETDQCLPK
ILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAISKECLSLLSDLT
QRLIAQQEAAAANGRAKQPAGELKISPQTPGAVVTEDMSFQLQRSNVIPRAPMPSLVKSS
LLPLKTSPGSDVGTPFSSPALNCKGGILDLNSPWHGSVQSPHIMRRGPKLWTSNSDLQMN
GSHQESFPVLSVVRAGSEAVQPSFIYTWLQNKQEQIKNFLSKRVLIMYFFSKHPEASIQA
VFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPTILNTLLTLQEVVDRHFKLPHVSS
KPPRISGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSTEHKKRLQQFLEYK
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtgatactagtaataagcatcttcaactttgaattttatgcagttgtgcca
tcgataccatgctctcgattagcactgataggaaaaattattcaccctcagcaagttatc
cattcagtcgttcatgctgtaatgggaatgttggttgcctggtgtgccgcagttatgaca
aaagggaagttccagtttcttgctgtgccctgcacatcttcagaaagcctagatgatgct
gttcctcagatgtgtctaaatgaataccacctctttttcctgctgtctggagctttcatg
ggatacagttatagtctcttgtatcttgttaacaatatgagttacttgccatttccaatc
atccagcaatacaagtacttacgtttcagacgatctttgcctcttcttgttaaacacagt
tgcgcggaatccctgtatttggttagaaacttctgtattgcgtattacttttttggttat
atcccaagggtatggataagtaccacaatggatcttcatatagacagtaaattgcatcct
cttgacactctgactggcttattggatctctccttgctctaccacacctggttatgtgga
gtgtttcttctgattacctggtacattgcatggttactcttcaaaatctatgctacagag
acacatcattttcctgtccaggcaacttttgctgaggagacggaccagtgcctacctaaa
attttaaacagcaaccctcccctcattataaagtttttagccttgcaagacttgatgtta
ctttcccagtactctcctgttcgccgacaggaagtttttagtcttagtcagccaggcggg
cacccgcacaactggactgcaatatcaaaggagtgtttaagtcttctgagtgatctgacc
cagaggctgattgcacagcaggaagctgcagcagcaaatgggagagcaaagcagccagca
ggagaactgaaaatatctccgcaaactccaggagccgttgtgacagaagacatgtccttc
cagttacagagatctaatgtcattcccagagcccccatgccttccctggttaaatcatcc
ctgttgcctttaaagacgtcacctgggtctgatgttggtacacctttcagttcacctgct
ttaaattgcaaggggggaattctggatttaaactctccttggcatggatcagtccaaagt
ccccatattatgagaagaggaccaaagctgtggacatcaaattcagatctgcaaatgaat
ggttctcaccaagaatcctttccagtgctctctgttgtgagagcgggcagtgaggcagta
cagcccagctttatttacacatggcttcagaacaaacaagaacagataaaaaacttcttg
tcaaaacgagtactgataatgtatttcttcagcaagcatccagaagcctccatccaagct
gtcttctccgatgcccaaatgcacatctgggcattagaaggtctgtctcatttggtagcc
gcctcatttactgaagaccaatttggagttgtccaaactacactgccaactattctgaat
actttactgactcttcaggaggttgtagacagacatttcaaactgcctcatgtttctagc
aaacctcccaggatttcaggaagtttggtggacacatcctacaaaacactacgatttgca
cttagagcatctctgaaaacagcactataccggataactactgtctttggagaacacttg
aatgcagtgcaagtgtctacagaacataagaaaagacttcagcaattcttggaatacaaa
gaataa
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