Apteryx mantelli mantelli (North Island brown kiwi): 106497958
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Entry
106497958 CDS
T04298
Symbol
ARID1B
Name
(RefSeq) AT-rich interaction domain 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106497958 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aam03000
]
106497958 (ARID1B)
03021 Transcription machinery [BR:
aam03021
]
106497958 (ARID1B)
03036 Chromosome and associated proteins [BR:
aam03036
]
106497958 (ARID1B)
Transcription factors [BR:
aam03000
]
Eukaryotic type
Helix-turn-helix
ARID
106497958 (ARID1B)
Transcription machinery [BR:
aam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106497958 (ARID1B)
Chromosome and associated proteins [BR:
aam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106497958 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
106497958
NCBI-ProteinID:
XP_013814443
UniProt:
A0A8B7JWU0
LinkDB
All DBs
Position
Un
AA seq
1810 aa
AA seq
DB search
MGSQYGGASPAWAAAQQRSHPAMSPGSTGQAISRSQGSPMDPMVMKRPQLYGMGNNPHSQ
TQQSSPYPGQSYGPPGPQRYPVGMQGRAPAAMGGMQYPQQQIPPQYGQQGVSGYCQQGQQ
PYYNQQPQPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGTRSQPSMAPGKPNHEDLNLIQQ
ERPSSLPVEVLASEDATFGHKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQS
PFSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQPESSSH
PALSQSPMPQDRGFMAGIQRNPQMSQYGPQQTGPSMSPHPSPGGQVHPGIGSFQQSNSGG
TYGPQMSQYGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPCGTMPLGR
MPSAGMQSRPFPGNMSSVTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ
SRQGNFPAMNQSGIMGSSSPYTQPMNNSSSLMNPQAPPYSMAPNMVNSSAGNAPMGLADM
MTPGESKLPLPLKADGKDEGAPQPESKAKKSSSSTTTGEKITKVYELGNEPERKMWVDRY
LTFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSS
AASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQ
STGSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTP
NAPYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEAFMTPGQMPNSGIQDMYNQSPSG
AMSNMSMSQRQQFSYGSGYDRRSDHGLGPEGSMGPPGQSNMVPSNSDPSMYSPNHYPGHQ
RHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDVYNMQYG
NQQQEMYNQYSNAYTGPDRRPMQGQYPYPYNRERMQGPGQMQQHGIPPQMIGGPMQSSSS
SEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHV
NQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFL
PSMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPE
AWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIF
GILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKEENDECIDYFDEDEEEGEDEKVEGE
EKSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFDSGLLHW
QLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDLEGKGESEEQQEKSITATIDD
VLSARPGALPEDSNPGSQAESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQD
SLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEE
EEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCP
SAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYV
GDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNL
MHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVI
CDVLFQIGQL
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgcagtacggaggcgcgagcccggcctgggcagcggcgcaacaaaggagccac
ccggccatgagccccggcagcaccgggcaggccatcagccggagccagggcagtccaatg
gatccaatggtcatgaagagacctcagttgtatggaatgggcaataaccctcattctcag
acacagcagagcagcccatatcccgggcagtcgtacggccctcccggcccccagcgctat
ccggtgggaatgcagggccgggccccggcagccatgggaggaatgcagtatccacagcaa
cagataccgcctcagtatggtcagcaaggtgtaagcggctactgccagcagggccagcaa
ccgtattacaaccagcagccgcagcctcagcatctgccaccccaggcacaatatctgtcg
caggcccagcagaggtaccaggctcagcaggacatgtctcaggaaggctatggaaccaga
tctcaaccctctatggccccaggaaaacctaaccacgaagacttgaatctgatccagcaa
gaaagaccatcgagcttaccagttgaagtcttggcctcggaggatgctacatttggacac
aaggatttatctggctccattgacgacctgccgactggaaccgaagcaacgctgagttca
gccgttagcgcgtctgggtctacaagcagtcagggggagcagagcaaccctgcacagtca
ccgttctcccctcacgcctctccacatctctctggcatccctggaggtccgtcgccttct
cctgtcggctctcctgttggaagcaaccaatcaagatctggtcccatttctccagcaagt
attccaggcagtcagatgccaccacagcctcctggcagccagccagaatccagctcccac
cctgctttgagccagtcaccaatgccacaggatcgaggtttcatggcaggcatacagagg
aacccccaaatgtcacagtatggacctcaacaaactggaccttccatgtcaccacaccct
tcacctggaggccaagtacatcctggaattggtagctttcagcagagtaattcaggtggt
acttatgggcctcagatgagccagtatggaccacaaggaaactattccagaccaccaaca
tacagtggcgtgcccaacacgagttacagtggcccaggacccggcatgggtataaatgcc
aacagtcagatgcatggacaggggccaagccagccttgtggtaccatgcccctgggacgg
atgccatcagctgggatgcagagcagaccatttcctggaaacatgagcagtgtgaccccc
aattctcctggcatgtctcagcagggaggccctgggatgggcccacccatgccaactgtg
aaccgtaaggcacaggaggcagctgctgcagtgatgcaggctgctgcaaactccgctcag
agcaggcaaggcaattttcctgccatgaatcagagcggcattatgggatccagctccccc
tacactcagccgatgaacaacagctccagcttgatgaacccgcaggctcctccttacagc
atggcccctaacatggtgaacagttcagcaggtaatgcacctatgggtcttgcagatatg
atgacacccggtgagtccaaactcccccttcctctcaaagcagatggcaaggacgaaggc
gccccgcagcccgagagcaaggcaaagaaatcaagttcctctaccacaactggagagaag
atcacaaaagtctatgaactaggaaacgagccagagcgcaagatgtgggtagaccggtat
ctcactttcatggaggagaggggcacgcctgtggccagtctgccggctgtgggcaagaag
cccctggacctgttcaggctctatgtctgtgtcaaggagattggaggtttagcacaggtt
aataaaaacaagaagtggcgtgagctggcaaccaccttgaacgttggcacttcgagcagt
gcagccagctccctgaaaaaacaatacattcagtacctgttcgccttcgagtgcaagatt
gagcgtggggaggaaccccctccagaagtcttcagcactggagatactaagaaacaacct
aagattcagccgccatctcctgctaattccggttccttacaaggcccacagactccacag
tctactggtagtaattccatgacagaagtgccaggtgatttgaagcccccaacaccagca
tcaacacctcatggacaaatgacacctatgcagggtggcagaaacagcgcagtgagcgtg
catgatcccttttctgatgtaagcgattcagcgttcccgaagcgaaactccatgacgcca
aatgcaccataccagcagggaataaacatgccagatatgatgggaaggatgccgtatgag
ccgaataaagatccatttggtggaatgagaaaagtgcctggaagcaatgaggctttcatg
acccctggacaaatgcccaacagtggaatacaagatatgtataaccagagtccatctgga
gcaatgtccaacatgagcatgagccagcgacagcagttctcttatggaagtggctatgac
aggaggtcggatcatgggctgggtcctgaaggcagtatgggaccacctggtcaaagcaac
atggtgccttcaaacagtgacccaagcatgtactctcctaatcattaccctggccatcaa
aggcatgaaccatatgggcagcagtatccaggacaaggacctccctcaggacaaccaccg
tatggaggacatcaacctggaatgtatccacagcagcagaactataagcgacacatggat
ggcatgtatgggcctccagccaaacgccacgaaggggatgtgtataacatgcagtatggc
aaccagcagcaggaaatgtataaccagtacagcaatgcttacactgggcccgacaggagg
cccatgcagggacagtatccatatccatataaccgggagaggatgcagggcccaggacaa
atgcagcagcatggaatacctccccagatgattggtggccccatgcagtcgtcatcctcc
agcgaaggtcctcagcagaacatgtggccaacacgaaatgatatgccttatccttaccag
aataggcaaggtccaggaggccctgcacaggccccaccgtatccagggatgaatcgcact
gatgatatgatggtacctgaccagagaataaaccacgaaagtcagtggccttctcatgtc
aaccaacgtcagccttcttatatgtcatcctcagcctccatgcagcctatcactagacct
cctcagtcatcctaccagacaccaccctctatgccaaaccacatttctagagctccaagt
ccagcatccttccagcgctctctggaaaaccgtatgtctccaagcaagtctcctttccta
ccctccatgaagatgcagaaggttatacccacagttccagtgtcacaggtcacaggacct
ccaccccagccaccaccaattaggcgcgaaattaccttccccccaggctctgtagaagca
tcgcaaccagtcttaaaaccaagacgaaagattacctcaaaagatattgtaactcctgag
gcctggagagtgatgatgtctctcaaatctggtcttttggccgaaagtacctgggcgcta
gacactattaatattcttctgtatgatgacagcaccgttgctactttcaacctctctcag
ttgtctggatttcttgagcttttggtagaatattttagaaaatgcctgattgacattttt
ggaatccttatggaatatgaagtgggagatccaggtcacaaagcacttgatcacaaagca
gccaagaaagatgatagccagtccttggcagaggatactgggaaagaggagaacgatgaa
tgtattgactattttgatgaagatgaggaggagggggaggatgaaaaggtagaaggagaa
gaaaagagcattgttttttccactcctggtgccattgctgatccaagtgagaggccaaaa
caagccagtaaatttgacaagctgccaataaagattgtaaagaaaaataatctgtttgtt
gttgaccgatctgacaaacttggacgtgttcaggaatttgatagtggacttctccactgg
cagcttggtggtggtgacacgactgagcacatccagactcactttgaaagcaagatggag
attcctccacgcaggaaagcccctcctcccttgaattctccaagcaaaaagaaggacctc
gaggggaaaggtgaatctgaggaacaacaagaaaaaagtataacagctaccattgatgat
gtcctctcagctcggccaggagcattgcctgaagactcaaaccctggttcccaagcagag
agcagtaaatttccctttgggatccatcaagccaaaagccaccggaatattaaactgcta
gaggatgagccaaggagccgggatgagactcctctatgcaccataacccactggcaagac
tccttggccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtgcct
ggcaatgacaccgaaatgtccaaacatccaggcttggtgctgatcctgggaaagttgatc
cttcttcaccatgagcatccagaaagaaagcgagcgccacagacatatgagaaagaggaa
gaggaggacaaaggggtggcctgcagcaaggatgaatggtggtgggactgcctcgaggtc
ttgagggataatacattggtcacattagccaacatttctgggcagctagacttgtctgct
tacacagaaagcatctgtttgccaattttggatggcttgctgcactggatggtgtgccca
tctgcagaggcacaggatccttttccaaccgtggggcccaactcagttctttcgcctcag
agacttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtggaccttatc
ttggccacgccccccttcagtcgtcaggagaaactctacgctactttagttaggtacgtt
ggggaccgcaaaaacccggtctgccgagaaatgtccatggcgctcttatcgaaccttgcc
cagggggacacattagcagcaagggcaatagctgtgcagaagggaagcatcggaaacttg
ataagcttcctggaggatggggtcactatggcccagtaccagcagagccagcataacctc
atgcacatgcagcctccacctctggagccacctagcgtagacatgatgtgcagggcagcc
aaggccttgctggccatggctagagtggacgagaaccgctcagagttccttttgcacgag
ggtcgtttgctggatatctcaatatctgctgtcctgaactctctggttgcatctgtcatc
tgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
