Apteryx mantelli mantelli (North Island brown kiwi): 106498103
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Entry
106498103 CDS
T04298
Symbol
VPS39
Name
(RefSeq) VPS39, HOPS complex subunit
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04140
Autophagy - animal
aam04142
Lysosome biogenesis
aam04145
Phagocytosis
aam04148
Efferocytosis
aam05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
106498103 (VPS39)
04142 Lysosome biogenesis
106498103 (VPS39)
04140 Autophagy - animal
106498103 (VPS39)
04148 Efferocytosis
106498103 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106498103 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aam04131
]
106498103 (VPS39)
Membrane trafficking [BR:
aam04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
106498103 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
VPS18_solenoid_2nd
Beta-prop_RIG_2nd
LIF1_N
Lgl_C
DUF4145
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
106498103
NCBI-ProteinID:
XP_013814667
LinkDB
All DBs
Position
Un
AA seq
915 aa
AA seq
DB search
MVTGASSRRGSVTSDSPVRPGFVLASRQLLAAGSDTSVIARSRNYCLKVGPLFWPYKEAR
FLRREEWLLVGTKQGHLLLYRIKKDIGCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVS
LLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHSGTGEEVLRMCVAVRKKLQLYFWKD
REFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVA
PVADGKVAVGQDDLTVVLNEEGTCTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFE
PRLLVQSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLA
EMKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDY
RKQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIK
SKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEK
KGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLVFSYSIWVLRDFPEDGLK
IFTEDLPEVEALPRDKVLGFLIENFKSLAIPYLEHIIHVWEETGADFHNCLIQLYCEKVQ
GLMKEYLSSFPADKTPVPAGEEGGDLGEYRKKLLLFLEKSSCYEPGRLISDFPFDGLLEE
RALLLGHMGKHEQALFIYVHILKDTKMAENYCHKHYDRNKDGNRDVYLSLLRMYLSPPSV
HCLGPIKMEVLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEEN
AQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCTVCKKKIGNSAFARYPNAI
VVHYFCSKEVNTVDT
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgggggcttcttctagaaggggcagcgtcacaagtgactctcccgtgcgcccc
ggttttgtgttagccagcaggcagctgttagcagctggctccgataccagtgttattgcg
agaagccgcaattactgccttaaagtcggaccccttttctggccgtacaaagaggctcga
ttcctacgtcgggaggaatggctccttgtcggtaccaaacaagggcatcttcttctttac
aggatcaagaaagacataggttgcaataggtttgaagtgacactagagaaatccaacaag
aacttctcaaaaaagattcaacagattcatgttgtttcccagtttaaaattctggtgagt
ctgttagagaataacatttatgtccatgacctgttgacatttcaacaaatcactacagtt
tccaaggcaaaaggtgcatctctcttcacttgtgatcttcagcattcaggtacaggggaa
gaggtgctgagaatgtgtgtggcagtacggaagaagctacagctttatttttggaaggac
agagaatttcatgaactacagggggacttcagtgtacctgatgtaccaaagtctatggcc
tggtgtgaaaactccatctgtgttggtttcaagagggactattatctgatacgggtggat
ggaaaaggatccatcaaagaactgtttcctacaggcaagcagctagaaccattggtagcc
cctgtagcagatggaaaagttgcagttggccaagatgatctaactgtagtgctaaatgaa
gaagggacctgtacccagaaatgtgccttgaactggacagatattcctatagccatggaa
caccagcctccctacattattgctgttctgccaaggtatgtggagatccgcacttttgaa
cctcggttgctggtacagagtattgagctgcagagaccacgcttcatcacctctggaggc
acaaatattatatatgtggcaagtaatcactttgtctggcggcttattccagtctccata
gcaacgcagatccaacaacttctacaagacaagcagtttgagttggctttgcagttggca
gaaatgaaagatgattcagacagtgagaagcgacaacaaattcatcacattaagaacctc
tttgccttcaacctcttttgccagaagcgttttgatgaatccatgcaagtttttgccaag
cttggtacagatcccactcatgtgatgggtctgtaccctgacctcctgcccacagattac
aggaaacagctacagtatcccaaccccctgccagggctctctggggcagagctggagaag
gcacatttagctctcatagactacctaactcaaaaaagaagtcagctggtaaagaagcta
aatgattctgaccatcagtccagtacctcacccctcatggaaggaacacccacgatcaaa
tccaaaaagaagttgctacaaatcattgataccaccctgttaaagtgttacctccacaca
aatgtagcgctggtggcaccattgctacgtctggagaacaatcactgccatattgaagag
agtgagcatgtactaaagaaagcacacaaatatagtgagctgataatactgtatgagaag
aagggcctgcatgagaaagcattacaggtactagttgatcagtcgaagaaagccaactca
cctttgaagggtcatgagaggacagtgcaatatctgcagcatttgggcacagagaacttg
catttggtattctcctactccatctgggtgctaagagattttccagaagatgggctgaag
atatttacagaagacctccctgaagtggaagctttgccacgagacaaagtgcttggtttc
ttgatagaaaactttaagagcttggctattccttatctggaacacatcattcatgtctgg
gaagaaactggtgcagattttcacaactgtctcatccagctgtactgtgagaaggtgcag
ggcttaatgaaagaatatctcagttctttccctgcagataaaacaccagtgcctgctggg
gaggaaggaggagacttgggagagtacaggaaaaagctgctgctttttcttgagaagtct
agctgttatgaacctggtcgactaattagtgacttcccctttgatggtctcctagaagaa
cgtgctctgctcttgggtcatatgggaaagcatgagcaagctctctttatttatgttcat
attttgaaggacaccaaaatggctgaaaactactgccataaacattatgacagaaacaaa
gatggcaacagagatgtctatctgtctctgctccggatgtatctctccccacctagtgtt
cattgcctggggccaatcaagatggaagtgttggagcctcaagccaatctgcaggctgct
ctgcaggttttggagctacatcacagcaaactggataccaccaaggcaataaacctactt
ccagcaaacacacagattagtgagattcgaatcttcctagagaaagtccttgaagaaaac
gcccagaagaaaagatttaatcaagtactcaagaatcttctccatgctgagtttctgagg
gtccaggaggagcggatcttgcatcagcaagtgaagtgcattattacagaggagaaggtg
tgcactgtatgtaaaaagaagattggtaacagtgcatttgcccgataccctaatgcaata
gttgtgcattatttctgctccaaagaagtcaacacggtggacacctga
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integrated database retrieval system
