Apteryx mantelli mantelli (North Island brown kiwi): 106499174
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Entry
106499174 CDS
T04298
Symbol
COL3A1
Name
(RefSeq) collagen type III alpha 1 chain
KO
K19720
collagen type III alpha
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106499174 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aam00536
]
106499174 (COL3A1)
Glycosaminoglycan binding proteins [BR:
aam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106499174 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
106499174
NCBI-ProteinID:
XP_013816020
UniProt:
A0A8B7JY77
LinkDB
All DBs
Position
Un
AA seq
1462 aa
AA seq
DB search
MMSFVQKVTLLILAVFQPSVILAQQDVTIETCTHLGQVYADRDVWKPEPCQICVCDSGSV
LCDDIICDDQELDCPNPEIPFGECCPVCPQTTTQPTRTPPPVVRGPKGDPGSPGIPGRNG
APGPPGQPGSPGAPGAPGICQSCPSVNGGSFSPQYDSYDVKAGSVGVGYPQPISGFPGPP
GPSGPPGPPGHAGPPGANGYQGSPGEPGQPGPSGPPGPPGLIGPSGPPGKDGEPGRPGRN
GDRGIPGIPGHKGHPGVPGMPGTKGQRGFDGKDGAKGDSGAPGPKGETGLPGANGSPGQP
GPRGPAGERGRPGNPGGPGAHGKDGSPGAAGPPGPPGPPGTAGFPGSPGFKGEAGPPGPA
GASGTPGERGEPGPQGHAGPPGPQGPPGRAGSPGNKGEMGPSGIPGAPGLPGGRGLPGPP
GTSGNPGAKGSPGEPGKNGAKGDPGPKGERGENGTPGAAGPPGEEGKRGANGEPGQNGVP
GTPGERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGTPGERGQDGGPGLPGMRGLP
GIPGSPGSDGKPGPPGQQGESGRAGPPGPAGPRGQPGVMGFPGPKGNEGAPGKNGERGPG
GPPGTPGPAGKNGDVGLPGPPGPPGASGERGEPGPSGSPGLQGLPGGPGPAGENGKPGEP
GPKGEIGGPGFPGPKGENGIPGERGAQGPPGPPGARGGPGPAGSEGAKGPPGPPGAAGGT
GLPGLQGMPGERGASGSPGPKGDKGEPGGKGADGIPGARGERGNVGPIGPPGPAGPPGDK
GETGPAGAPGPMGVRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPTGLRGEAGPP
GAAGPQGGSGAPGPPGPQGTKGERGSPGGPGAAGFPGARGLPGPPGNNGNPGPPGSAGPA
GKDGPPGPPGSAGSPGSPGPAGTRGEPGSPGEKGPPGARGERGAPGEPGPQGIVGGRGNT
GLPGLRGPAGPAGMAGAKGEDGRPGTNGAPGERGAPGPQGPVGQRGLPGEPGRDGNPGSD
GSPGRDGSPGGKGDRGESGSPGPPGPPGHPGPAGNNGAPGKAGERGFQGPPGPPGSTGPA
GARGPAGPQGPRGDKGETGERGSNGIKGHRGFPGNPGLPGPPGPLGPQGAIGSPGASGAR
GPPGPAGPPGKDGTSGYPGPIGPPGPRGNRGESGPAGPPGQPGLPGPSGPPGPCCGGGVV
GMGAGEKGPSGYGYEYRDEPKENEINLGDIISSMKSINNQIENIISPDGSRKNPARNCRD
LKFCHPELKSGEYWIDPNQGCKMDAIKVYCNMETGETCLNANPSTVPRKNWWTSQSSERK
HIWFGEAMNGGFQFSYGDPELPEDVSEVQLAFLRILSSRASQNITYHCRNSIAYMDQDSG
NVKKALKLMSSVESEIKAEGNSKFTYAVLEDGCTKHTGKWGKTVFEYRTRKTMRLPVTDI
APIDIGGPDQEFGVDIGPVCFL
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaagtaactttgctcattcttgccgtgtttcaaccctcagtt
attttggcacaacaagacgtcaccatagaaacatgtacccatcttggccaggtttatgct
gacagggatgtttggaaaccagagccatgccagatctgtgtgtgtgactccggatctgtt
ctctgtgatgacatcatctgcgacgatcaagagttagactgtcccaacccagagattccc
tttggagagtgttgtccagtttgtccacaaacaacaacacaacctactagaactcctcca
cccgttgtccgaggtcccaagggagatcctggttctcctggtattccaggcagaaatggt
gcccctggccctcctggacagccagggagtcctggagctcctggtgccccagggatctgc
cagtcatgtcccagtgtaaatggaggcagtttttctccacagtatgactcctatgatgtg
aaggccggttcagttggtgttggttaccctcagcccattagtggctttccaggacctcct
ggccccagtggcccccctggcccacctggtcatgcaggtccacctggtgctaatggatac
caaggttcccctggagaaccaggacaacctggcccttctggacctccaggccctcctgga
ctgataggcccatctggtccaccaggaaaagatggagaaccaggaagaccaggtagaaat
ggagatcgaggaattcctggaataccgggtcacaaaggacaccctggtgtgcctggaatg
cctggaacgaagggtcaaagaggttttgatggaaaagatggtgcaaaaggtgacagtggt
gctcctggtccgaagggtgaaactggtcttcctggcgcaaatggatcaccaggccaaccg
ggaccaagaggtccagctggtgaaagaggaagacctgggaatcctggtggccctggtgcc
catggcaaagatggatctccaggagcagctggcccacctggtcccccaggtccccctgga
actgcaggatttccaggctctccaggttttaagggtgaagctggtcctcctggtcctgca
ggtgctagtggtactcctggagagagaggggaacctggtcctcaaggtcatgctgggccg
cctgggcctcagggtcctcctggaagagctggaagccctggcaacaagggtgaaatggga
ccttctggtattcctggtgctcctggtttgccaggaggccgtggtcttcccggtcctcca
ggtacaagtggaaatcctggagcaaaaggctctccgggagaacctggtaagaatggtgca
aaaggagatccaggcccaaaaggagagcgaggtgaaaatggcaccccaggtgctgctgga
cctcctggtgaagaaggcaaaagaggtgcaaatggtgaaccaggccagaatggcgtacct
ggtacacctggagaaaggggctcccctggcttccgtggcttaccaggtagcaatggactt
ccaggtgaaaagggtcctgcaggtgaacgtggtagcccaggtcctcctggcccaagtgga
actccaggagagcgtggacaagacggaggcccaggtcttccaggaatgagaggtttgcct
ggaattccaggaagtcctggaagtgatgggaaacctggccctccaggtcagcagggagaa
tctggccgtgctggtccacctggcccagcaggcccacgtggtcaaccaggtgtaatgggt
ttccctggtcctaaggggaatgagggtgcaccaggtaagaatggagaaagaggccctggt
ggaccacctggaacacctggtcctgctgggaagaatggtgatgttggactcccaggtcct
cctggacctcctggtgcttctggagagagaggagaaccaggaccatcaggttcacctggc
ctccagggattgcctggtggaccaggaccagctggagagaatggaaagcctggagaaccg
gggccaaaaggtgaaattggaggacccggattcccaggccctaagggtgaaaatggtatt
ccaggtgaacgtggtgcacagggccctccaggacctcctggagcaagaggtgggccaggt
cctgctggctcagaaggtgccaaggggcctcctggaccccctggagctgctggaggcaca
ggactccctggcctacaaggaatgccaggagaaagaggagcttctggaagtcctggacca
aaaggggataagggagaacctggtggcaaaggtgctgatggcattcctggtgcaagagga
gagagaggtaatgtaggtcccatcggccctcctggtcctgctggcccacctggagataag
ggagagactggtccagcaggcgccccaggtccaatgggtgtccgtggtggtcctggtgag
agaggagaacaaggtctcccaggacctgctggcttccctggagctcctggccaaaatggc
gaacctggtgggaaaggagaaagaggcccgactggtctaagaggagaggctggacccccc
ggagctgcaggtccccaaggtggttctggtgcaccaggtccacctggtccccaaggaaca
aaaggagaacgtggatctcctggaggacctggtgctgctggtttccctggtgctcgtggt
ctacctggtccccctggtaacaacggcaatccaggtccgcctggcagtgcagggcctgca
ggcaaggatgggcctcccggaccccctggtagcgctggttctcctggcagtccggggcct
gctggaacaagaggtgagcctggctcaccaggtgaaaaagggccaccaggtgcacgagga
gaaaggggagcgccaggtgaaccaggtcctcaaggtatcgttggtggccgtggtaacaca
ggcttaccaggtctgcgtggtccagcaggtccagctggtatggcaggtgcaaagggtgaa
gacggtagaccaggcaccaatggtgccccaggagaacggggtgctcccggtccacagggt
cctgttggacaaagaggtctacctggagaacctggtagagatggtaaccctggctcagat
gggtcgcctggacgtgatggatccccaggaggcaaaggtgaccgtggtgaaagtggctct
cctggccctcctggacctcctggtcaccctggacctgcaggtaacaacggtgcacctgga
aaagctggtgaaagaggatttcagggtccacctggccctcctggctctactggtcctgct
ggtgctcgtggtcctgctggtcctcaaggtcctcgtggtgataaaggtgaaactggtgaa
cgaggtagcaatggcataaagggtcacagaggatttcctggtaaccctggcctccctggt
cctcctggacctctgggtccacagggtgcaattggaagtccaggagcttcaggtgcaagg
ggtcccccaggaccagctggcccccctggaaaagatggtacaagtggttaccccggtcca
attggtcctcctggcccgcgtggtaacagaggtgaaagtggccctgcaggtccaccaggc
caacccggtcttcctggtccttctggtcctcctggtccatgttgtggcggcggtgtggtt
ggcatgggtgctggtgaaaaaggtccatcgggctatgggtatgaatatcgagatgagcca
aaagaaaatgagataaacctgggtgacattatatcttcaatgaaatcgattaacaaccag
attgaaaacatcattagtcctgatgggtcacggaagaatccagctcgtaactgcagagat
ctgaaattctgccatcctgagctcaagagcggagagtactggattgatcctaaccaaggt
tgcaagatggatgctattaaagtatactgtaatatggaaactggcgagacatgcctcaat
gctaaccccagcactgtgccaaggaaaaactggtggaccagtcaaagcagtgaaaggaaa
catatttggtttggagaagctatgaatggaggcttccagttcagctatggagatcctgag
cttccagaggacgtctcggaagttcagctggcgttcctcaggatcctctctagccgggcc
tctcagaacatcacttaccactgcaggaacagcattgcctacatggatcaagacagtgga
aatgttaaaaaagccctgaaactgatgagctctgtggaaagtgagatcaaggctgaagga
aacagcaaattcacatatgctgttctggaggatggctgtaccaaacacactggcaaatgg
ggtaaaacagtctttgaatacagaacacgcaagacaatgaggttgcctgtgactgatatt
gcacccatagatattggtggtcctgatcaggaatttggtgtggacattggcccagtctgc
ttcttataa
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