Apteryx mantelli mantelli (North Island brown kiwi): 106499385
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Entry
106499385 CDS
T04298
Symbol
CDRT1
Name
(RefSeq) CMT1A duplicated region transcript 1
KO
K10266
F-box and WD-40 domain protein 10
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aam04121
]
106499385 (CDRT1)
Ubiquitin system [BR:
aam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106499385 (CDRT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_SCAP
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_SPT8
F-box-like
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
F-box
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WD40_like
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_IFT140_2nd
Beta-prop_WDR19_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
106499385
NCBI-ProteinID:
XP_013816307
UniProt:
A0A8B7JZ23
LinkDB
All DBs
Position
Un
AA seq
984 aa
AA seq
DB search
MERQEYSLYSAPSLRCGKETDLVPVCETCETCVLAWRIFSTKEWFLRAGALTQRKFLLGI
IKRFDSFSLLSYIERLLRVTQEKDFTYVRSQISYSLRDRNTFSSNGALDPQRLEQEMQDT
WWWFTDSNYWTKANYTLLLLKLCDAKLLFTAADLVREQIILARPDKEDIDESFPKPLNTV
KDDSHPQPSCQIQFVLQSVSTSSAALASRVSSAKISQFGNTGGQPSTVSVRPQNSEYVFQ
KGPGMVDKSSVVSLVAPGVTVVPVSLQSVSHVNKYKDFIRCLPTHLSNYILGLLDQKSLN
TCAAVSKCWAFLAKEVKKEHVSQKIIQEEILCLQGSCPRGVVSNYAKIVNVTIPWLNKAG
DVIHVKDHKWSSKMKEEEEDSLQLAYHGLQTDTIQLEERNVFCGSYNIRVLTDQSDPNRV
IHYSGGNLVAVGSADRKVRFLGVLEMKEVPPLLSGHAGSIKALYLNEKEGFVLSASFDLS
IRCWDIYSGACMKIFNGHSGTITCLDLYKDKFVSGAKDGMVKVWDLESRKCLKTLKHNNT
IWVVKMNGTHIVSGCDKGLVKVWYADTGTLIKVLEGHQGPVKCLSFDRWHLVTGSTDGYA
LAWSMLGNHKRCLTAFRHPKGVLFLEFLYLRVISGCADGKIRIFNYLTGSCLKVMRANSR
GDPISSFCVAENRMVINALSCLLMFQFEDVKWNYMLKTDRKMAGKKKEQRKGPSSKTPVH
FQQMKHHKVSQKTNQLPLEMKDADQLMLSYLICCRSPKGCGMSQTHRYKLMKSAACQPQQ
NLLKSTKSFSIQAQQQKNLFIPDNQQPHMIDSEKSTRAYSARTVADTDGESEYGFSIYVP
AHADRTEATLPYKKKRGPSCPMSPNRILLTVSTLQNSYKSALVSSNIKHTPTAMEAWEPP
LHQQEHPEKMQIYKTSMEHKKDQTVQLQHMRSNSDSLTMKRISTPFETKRLQLKLTDSLH
GPTVKSSIPAPSIVCPNCGMLEEK
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcaggagtacagcctgtactctgctcctagtctgcgatgtgggaaggaaaca
gacctagtgcctgtgtgtgaaacctgtgagacctgcgtcttggcctggaggatcttctcc
accaaggagtggttcctgcgagctggcgcgctcacgcagaggaagttcctgctgggcatc
atcaagcgttttgacagtttcagtttactcagctacatcgagagacttctgagagtgacc
caggagaaggatttcacttatgtgcgctctcaaatcagctacagcctcagagatcggaac
accttcagttccaacggtgctttggatccacaaaggctagagcaagagatgcaggacacg
tggtggtggttcacagatagcaactattggactaaagcaaactacactctgctcttactg
aaactgtgtgatgccaagttactgtttacagcagctgacctggtgcgagagcaaattatt
cttgcaagaccagataaagaagacatagatgaatcatttcctaaacccttaaacaccgtc
aaagacgacagtcatcctcaacccagctgccagattcaatttgttttacaatctgttagc
acttcctctgcagcccttgcaagtagagtctcatctgcaaaaatcagccagtttggtaat
acaggtggtcaaccatcaacagtgtctgtccgtccccaaaacagtgagtatgtcttccag
aagggtcctggtatggtggacaagtcatctgttgtgtccttagttgctccaggtgtcact
gtggttccggtatctctccagtcagtctctcatgtcaacaagtacaaggacttcattcgc
tgcctgccaactcacctgtccaattacatcctggggcttttggatcaaaaatccctcaac
acatgtgcggctgtgagtaaatgttgggctttcctggccaaggaagttaagaaggaacat
gtgtcacaaaaaataatacaggaggagatcctgtgtttgcagggatcatgccctagggga
gtggtttccaactatgctaaaatagtcaatgtgacaattccatggttaaacaaagcggga
gatgtcatccacgtgaaagaccacaaatggagtagcaaaatgaaggaggaggaggaagat
agtctgcagttagcttatcatggcctgcaaactgacaccatccagctggaagagagaaat
gtcttctgtggctcctacaatattcgtgtcctcacagaccaatcagacccaaacagagta
atccactacagtggtgggaacttggtagctgttggctctgcagaccgaaaagtgaggttt
cttggtgtgctggaaatgaaagaagtgcctcctctgctctctggccatgctgggagcatc
aaagcactgtacctcaacgagaaggaaggattcgttctcagcgcaagctttgatctcagc
atcagatgctgggatatatacagtggtgcctgtatgaaaatctttaatggtcactcgggg
accatcacttgcctggatttatacaaagataaatttgtgtcaggagccaaggatgggatg
gtgaaagtatgggatctggaaagcaggaaatgcctgaagactctgaaacacaataatacc
atttgggtagttaaaatgaatggcacccacattgtcagtggttgtgacaagggacttgtg
aaagtctggtatgccgataccggcactctgatcaaagtattagaagggcatcaaggtcca
gttaagtgcttgtcctttgatcggtggcacttagttacgggaagcactgatggatatgcc
ctggcatggagcatgttgggaaaccataagagatgcctaacagctttccgccacccaaaa
ggagttctgtttctggagtttctctatctcagagtcatcagtggctgtgctgatggaaag
attcgtatatttaactacctgactggaagctgcctgaaagtgatgagggctaacagcaga
ggggaccccatatcctctttctgtgttgcagaaaacaggatggtgatcaatgcactgagc
tgtctgctgatgttccagtttgaggatgtcaagtggaactatatgttaaagactgaccga
aagatggcaggaaagaaaaaggaacagcgcaaagggccttcaagcaaaacaccggttcac
tttcagcaaatgaaacatcacaaagtcagccagaagacaaatcagcttcctctggagatg
aaagatgctgaccagctaatgctgtcttacttgatctgctgccggtcaccaaaaggctgt
ggaatgtctcaaactcaccgctacaaactgatgaaatcagcagcttgccagccacagcag
aatttgctcaaaagcacaaaatcttttagcattcaggcacaacagcagaaaaaccttttc
attcctgataaccaacagccgcatatgattgactcagaaaagtcaacaagagcatattct
gcaagaacagtggcagatactgatggtgaatctgaatatggcttttccatctatgtacct
gcacatgctgacaggacagaagccactttaccgtataaaaagaaaaggggcccaagctgt
ccaatgtcccctaaccggatactcttaactgtcagtacactgcagaatagctacaagtca
gccctagtcagctccaatattaagcatactccaacagccatggaagcatgggaacctcct
ctgcatcagcaagaacaccctgaaaaaatgcaaatatacaaaacctctatggagcacaaa
aaggatcagacagtccagctccaacacatgagatctaacagtgattctctgaccatgaaa
agaatttcaacacccttcgaaaccaaaaggctgcagctcaagctaacagactctttgcat
ggacccaccgtgaagtcctccattcctgctccctccattgtatgtcccaactgtggtatg
ttggaagaaaagtga
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