Apteryx mantelli mantelli (North Island brown kiwi): 106500129
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Entry
106500129 CDS
T04298
Symbol
PABPC1L
Name
(RefSeq) poly(A) binding protein cytoplasmic 1 like
KO
K13126
polyadenylate-binding protein
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03015
mRNA surveillance pathway
aam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106500129 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
106500129 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106500129 (PABPC1L)
03041 Spliceosome [BR:
aam03041
]
106500129 (PABPC1L)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106500129 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
106500129 (PABPC1L)
Spliceosome [BR:
aam03041
]
Complex C
Other components
Complex C specific factors
106500129 (PABPC1L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
RRM_10
RRM_occluded
RBD_DEAH11
RRM_ACIN1
DUF8400
RRM_RdRP1_2
RRM_3
DUF6262
ATP-grasp_2
DUF1464
Motif
Other DBs
NCBI-GeneID:
106500129
NCBI-ProteinID:
XP_013817260
LinkDB
All DBs
Position
Un
AA seq
422 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFS
AFGNILSCKVVCDENGSRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRKERE
AEFGARAMEFTNVYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDNTGRSKGFGFVNFEK
HEEAQKAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQIKQERVSRYQGVNLYVKN
LDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVST
KPLYVALAQRKEERKAILTNQYMQRLATMRALPGPLLGSFQPPAGYFLPPIPQQRILQLP
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctagtggccccggatatccgttagcctctctctacgtgggagacctccacccg
gatgtgactgaagccatgctctacgagaagttctcgcctgctgggccgataatgtccatc
agggtctgtcgggatgttgccacgcgccgatcgctgggctacgcctacataaacttccag
cagcctgcggatgccgagcgagccctggacaccatgaattttgaagtgatcaaaggccgg
cccattcgaatcatgtggtcccagcgagaccctgggctcaggaagtcaggggtcggaaac
gtcttcatcaagaacctggatgactccattgataacaaagccttgtacgataccttctca
gcattcggaaacatcctgtcttgcaaggtggtttgtgatgaaaacggatcccgaggatac
ggctttgttcactttgagactcacgaggcagcaactcgagccattgagaccatgaacggg
atgttgctcaacgaccggaaggtatttgttggccattttaaatcccgcaaagagcgcgag
gcggagtttggggctagggcaatggaattcaccaatgtctacatcaaaaactttggggat
gacatggatgacgacagactgcgggaaatattctccaagtttggaaagacactaagtgtc
aaagtcatgatggacaacactggccgctcaaagggctttggatttgtcaactttgagaag
catgaggaagcccagaaggctgtggctgacatgaacgggaaggagatcaacgggcggatg
gtgtacgtgggccgagcccagaagcggctggagcgccagagcgagctgaaacggaagttc
gagcagatcaagcaggagagagtgagcaggtaccagggggtcaacttgtatgtgaagaac
ctggacgatggaatagacgacgagaggctgaggaaggagttctctccgtatggcaccatc
accagcgcgaaggtgatgacagagggtggacacagcaaagggtttgggtttgtatgtttt
tcctccccagaagaggctaccaaagccgtgacggaaatgaatggacggatcgtcagcact
aagcctctctacgttgcacttgctcaaagaaaagaagaacggaaagcaattctcactaac
cagtatatgcagagattagccaccatgagggccctacctggccctctccttggctccttc
caacccccggcggggtacttcctaccccccatccctcagcagcgtatcctgcagctaccc
cgatcctga
DBGET
integrated database retrieval system
