Apteryx mantelli mantelli (North Island brown kiwi): 106500322
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Entry
106500322 CDS
T04298
Symbol
SMG8
Name
(RefSeq) SMG8, nonsense mediated mRNA decay factor
KO
K18734
protein SMG8
Organism
aam
Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:
aam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aam03019
]
106500322 (SMG8)
Messenger RNA biogenesis [BR:
aam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106500322 (SMG8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
106500322
NCBI-ProteinID:
XP_013817487
UniProt:
A0A8B7K2G4
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All DBs
Position
Un
AA seq
886 aa
AA seq
DB search
MCLYLWPFPPAQDKDLLSWRVPRWFCETTQPRHHAPVCPTPLGRIAVRRNSPFGENWAAV
GDVLRFPPHAEAHEFWKHQEKLHCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGL
RQKVLPSLKAAIKDCPVGKEWKLNCRPCPPRLLFLFQLNGALKVDPLPGRGQDPCGHLEK
PPPKKHSPKRRLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVAGGAQDGED
PVAMLLDQLRSNCTMRETDSLLAPTLSGPRRYQMMRHGRQQLSFYAESSSSSSSSSGQLV
DCTLKEFLWQHVELVLSKKGFDDSVGRNPQPSHFELPTYQKWVAAALKLYEVTIEGKDDD
PTSLTGELSSKIMGSIKVLEGYLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKN
QLAQALRVYSQHARGPAFHKYAMQLNEDCFKFWSNGHQLCEERSLTDQHCVHKFHLLPKA
GEKPEADRNPPVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLE
HINFPVFQPSTPDPAPARDESSPAPPEGEIEKLKEKEPQTQGESTGLSLALSLGQSTGSL
GTYPPDPQGGGDNAESHGQSGDSKSEKRPSLVDRQASTVEYLPGMLHSNCPKGLLPKFSS
WALVKLGPAKAYNFHTGLDQQGFIPGTNYLMPWDIVIRTRTEDEGDLDTNSWPAPNKAVP
GKRSAVVMGRGRRRDDIARAFVGFEYEDARGRRFMCSGPDKVMKVMGGGPKESAIKALNS
DMPLYILSSTQGRGLKPHYAQFMRLFVVVPDAPLQITLTPQVQPGPPPCPVFYPEKQEIT
LPSDGLWVLRFPYAYVTERGPCFPPKESQQLMSYKVLRGILKAITQ
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctgtacctgtggcccttccctccagcccaggataaggacctgctttcctggaga
gtcccgcgttggttctgcgaaacaacccagccgcggcatcacgccccagtctgccccacg
cctttggggagaatcgctgtgcgacggaattccccgttcggggagaactgggctgctgtg
ggcgatgttctgaggtttccaccccacgccgaggcccacgagttctggaagcaccaggag
aagctgcactgcctgagcctcctctacctcttctccgtctgccacatcctgctgctggtg
caccccacctgctccttcgatatcacctacgaccgcgtcttcagggcgctggacgggctg
cggcagaaggtcctgccttccctgaaggctgccattaaagactgcccagtgggcaaggag
tggaagctcaactgcaggccgtgccctccgcgtctcctcttcctcttccagctcaatggg
gccctgaaggtggatcccctcccaggcaggggccaggacccctgcggtcacctggaaaag
ccaccccccaagaagcactcccccaagaggcggctgcagcatgcgctggaggaccagatc
taccgcatcttccggaagagcagggtgctaaccaaccaaagtatcaactgcctgttcact
gtgcctgctaaccaggccttcgtctacatcgtggctggtggggcccaggatggagaggat
ccagtggccatgcttctcgaccaactcaggagcaactgcaccatgagagagactgactcg
ctgctggctcccaccctgtccggacccaggaggtaccagatgatgcggcacggcaggcag
cagttgtccttctatgcagagagtagtagcagcagctccagctcctctgggcaacttgtg
gactgtaccctcaaggagttcttgtggcagcacgtggagctggtgctcagcaagaagggc
ttcgacgacagtgtggggaggaacccgcagccctctcactttgagctcccaacctaccaa
aagtgggttgctgcagctttaaaactgtacgaagtgaccattgaaggcaaagatgatgac
ccaacttctctcactggggaactgagttccaaaatcatgggcagcatcaaagtcttggaa
gggtatttagacatagacactaaattctctgaaaaccgttgccagaaagctctccccatg
gcccacagcgcgtatcaatccaacctgccccataattacaccatgacagtccataaaaat
caattggcacaagccttgcgtgtgtacagccagcatgcccgtggaccagcctttcataaa
tatgccatgcagcttaacgaggactgtttcaagttctggagcaatgggcatcagctttgt
gaagagcgaagtttgactgaccagcactgtgtgcataaattccatttgctcccaaaagca
ggggaaaagccagaagcagatagaaatcctccagttctgtatcacaacagccgggctcgt
tccactggtgcctgtaactgcggaaggaaacaagcgcctcgtgatgacccctttgatatc
aaagcagctaattatgacttctaccagctgctggaagaaaaatgctgtgggaaactggag
cacatcaacttccctgtgtttcagccaagcacacctgatccagcacctgctagggatgag
tcatcgcctgcccctccagaaggagagattgagaaacttaaagaaaaagaacctcagact
cagggagaaagcacaggcctaagcttagccctcagcctgggtcagtcgacaggcagcttg
ggcacttacccgcctgacccccagggtggaggtgacaatgcagaaagccatgggcagagt
ggtgactccaaaagtgagaagaggccaagtctggtcgatcgccaggcgtccactgtcgag
tacctccctgggatgctccattctaactgccccaaaggccttttgcccaaattctctagt
tgggcactggtcaagctgggccctgctaaggcttacaacttccacactggcttagaccaa
cagggctttatcccaggaacaaactacttaatgccttgggacattgtcatcagaacgaga
acggaagatgaaggagatctggacaccaattcctggcctgcacctaacaaagctgttcct
ggaaaaagaagcgcagttgtgatgggaagaggaagacggagagatgacatagctcgggct
tttgtaggatttgagtatgaagatgcacgtggtaggaggttcatgtgttcagggcctgac
aaggtcatgaaggtgatgggagggggaccaaaggaatctgctatcaaagccctcaattct
gacatgccactgtacatcctgtcatcaactcagggacgaggactcaagccacattatgct
caatttatgaggctctttgtggtggttcctgatgctccactgcaaataacgttaacacct
caggttcagccagggccaccaccttgtcctgtgttttaccctgagaaacaggagataacc
cttccatctgatggactgtgggtgcttagatttccttatgcatatgtgacagaacgcgga
ccctgttttcctccaaaagagagccaacaattaatgagttacaaagttctcagaggaata
ctgaaagcgattacacaataa
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