Acidianus ambivalens: D1866_00930
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Entry
D1866_00930 CDS
T06309
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
aamb
Acidianus ambivalens
Pathway
aamb03022
Basal transcription factors
aamb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aamb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
D1866_00930
09124 Replication and repair
03420 Nucleotide excision repair
D1866_00930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamb03021
]
D1866_00930
03036 Chromosome and associated proteins [BR:
aamb03036
]
D1866_00930
03400 DNA repair and recombination proteins [BR:
aamb03400
]
D1866_00930
Enzymes [BR:
aamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
D1866_00930
Transcription machinery [BR:
aamb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
D1866_00930
Chromosome and associated proteins [BR:
aamb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
D1866_00930
DNA repair and recombination proteins [BR:
aamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
D1866_00930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
XPD_arch
DUF7675
Motif
Other DBs
NCBI-ProteinID:
QGR20744
UniProt:
A0A650CSB3
LinkDB
All DBs
Position
complement(163568..165184)
Genome browser
AA seq
538 aa
AA seq
DB search
MDLRDWQIKLKDKVLDSLKRGFLVALNSPTGSGKTLFSLVVGTEFKGKVAYIVRTHNEYY
PVYRESKRLGKSFSFLVSKALACPFSTADVNPEDIKCSSCDIFSSIPIKVDDYPFSFLSK
LKKEGEEEGFCPYYSLLDSLSNSDVIVLTYPYFFIPRLREALGLDFSQYVVVVDEAHNLD
RLNELEERKLNLTIIDRAISQISNTTVIEILRRLKEEVKKKVLSEEKYILVQDYPKLTDD
ELEIIKEEYEALREKMIKEKRIKQIYLNNIIKFYETEGKVFSYKGSLVKKPITPEKYISI
LNDPSLSVILMSGTLQSKEFLRNVLGITRQIEYIDTEKEMKKKLSGTIDCILALDVTSAY
SLRTKEMWKKYASYILKIFYQAKGYVLAVFPSYSLMNEVMKLVNLPKLVEDEKTSLEDVY
KLKEKSIIAAVARGKLSEGIELTKDGKSLISDVVLVGIPYPAVDDYLKLQAEEISKITGQ
DVKDLLINTTALIAVKQAIGRAIRSVNDRANVWLLDKRYDSIMWKTKINCLNPKKIKL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtggatttaagggattggcaaataaaattaaaagacaaagttttagattcgttgaaaaga
ggatttttagttgctttaaattctcccactggtagtggtaaaacattattttctttggtt
gttggtactgaatttaagggtaaggtagcttatattgtaagaacgcataacgaatactat
ccagtatatagagaaagcaaaaggctaggtaaaagtttttcatttctagtaagtaaagcg
cttgcttgtccattttctactgctgatgtaaatccagaagatataaaatgttcaagttgt
gatatattttctagtattccaataaaggtcgacgattatcctttttcttttctttcaaag
ttaaagaaagagggagaagaggagggattttgcccatattattcattactagattcttta
tctaattctgacgtaatagttctaacttacccatattttttcatacctagattgagagaa
gcattaggattagatttttcacaatatgttgtggttgtggatgaagctcataatttagat
agattaaatgagcttgaagagagaaaactaaatttaacaataattgatagagcaatttct
cagatttcaaatactactgtaatagagatactaagaagattaaaagaagaagttaagaag
aaagtgttatctgaggaaaaatatattctagtacaagactatcctaagcttacagacgat
gagctagaaataataaaagaagagtacgaagctttaagagaaaaaatgataaaagaaaag
cgaataaaacagatttatttgaataatataataaaattctatgaaactgaagggaaagtg
ttctcctacaaaggaagtctagtaaaaaagcctataacaccagaaaagtacatttcaata
cttaatgatccgagtctttcagtaattttaatgtctggaactttacaatcaaaagaattc
ttacgtaatgtactcgggataactaggcagatagaatatatcgatactgaaaaagaaatg
aagaaaaaactaagtggcactatagattgcattctggctcttgatgtaacctctgcttat
agtttaagaactaaagagatgtggaagaagtacgcttcgtatattttaaaaatattttac
caagcgaaaggctacgtattagccgtattccctagctattcattaatgaatgaagttatg
aagctagttaatttgccaaagcttgttgaagatgagaaaacaagtctagaggatgtatat
aaactgaaagagaagtctattattgcagcagtagcaagaggtaagctttctgaaggaatt
gaacttactaaggacggtaaaagtttaatttcagacgtagtactagtaggaataccttat
cctgcagtagacgattaccttaaattgcaagcagaggagatttcaaaaattacagggcag
gacgttaaggatttgcttataaatactacagcacttatagctgtaaaacaagcaataggt
agggcaattagaagtgtaaatgatagggcaaatgtttggttattggataaaagatacgat
agcataatgtggaaaactaagattaattgtttaaatcccaaaaagattaagctataa
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