Acidianus ambivalens: D1866_01030
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Entry
D1866_01030 CDS
T06309
Name
(GenBank) RNA-binding protein
KO
K07573
exosome complex component CSL4
Organism
aamb
Acidianus ambivalens
Pathway
aamb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1866_01030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamb03019
]
D1866_01030
Messenger RNA biogenesis [BR:
aamb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
D1866_01030
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
D1866_01030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
S1
Zn_ribbon_3
FtrD-like
Motif
Other DBs
NCBI-ProteinID:
QGR20764
UniProt:
A0A650CSD3
LinkDB
All DBs
Position
181094..181660
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AA seq
188 aa
AA seq
DB search
MKGQGEITFPGDLLGVIEEFSPGEGSYEEDGNVRSSTIGKVFYDMINRRSNVLSPKKSIM
VTLRKAKYVYGIVNLIKEDVANVDIVSIEEKFITPISGLLHISQISNKRLNSILEAIRVG
DVIKAKPLTFTPPISLTIKQKDLGVIFAQCSICGHMMIKLDEEHLKCVYCGNVEQRKVGN
YVVKKYAN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggccaaggagagataactttccccggagatttactgggagtaatcgaagaattt
tctcctggagaaggatcttatgaagaagacggaaatgttaggtcttcgactataggaaaa
gtattttatgacatgatcaacagaagaagcaacgttctttctcctaaaaaatctattatg
gtaactttaaggaaggctaaatacgtttacggtatagtaaatctaataaaggaagacgta
gccaacgttgatattgtaagcatagaagagaaattcataacaccaatttctggactttta
cacatctctcaaataagtaataaaaggttaaactctatattagaagcaatcagagttgga
gacgtgataaaagctaaacctttgacatttactcccccaattagtttaaccataaaacaa
aaagatctaggagtaatctttgcccaatgttcaatttgcgggcatatgatgatcaaatta
gatgaggaacatttaaaatgtgtatattgcggtaatgtagaacagagaaaagtaggaaat
tacgtggtgaaaaaatatgcaaattaa
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