Acidianus ambivalens: D1866_05580
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Entry
D1866_05580 CDS
T06309
Name
(GenBank) DEAD/DEAH box helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
aamb
Acidianus ambivalens
Brite
KEGG Orthology (KO) [BR:
aamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamb03400
]
D1866_05580
Enzymes [BR:
aamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1866_05580
DNA repair and recombination proteins [BR:
aamb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
D1866_05580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
ResIII
Helicase_C
HHH_5
HTH_61
DEXQc_Suv3
DNA_pol_lambd_f
ATPase
Motif
Other DBs
NCBI-ProteinID:
QGR21517
UniProt:
A0A650CVP6
LinkDB
All DBs
Position
945172..947286
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AA seq
704 aa
AA seq
DB search
MEFTPIDKLNLDERIIKILKKKGIEKLNPVQTDAVNSGLLEGKRLLVTSPTGSGKTLIAE
LGIISHLLSDGGKAVYITPLKALTAEKYNELKDWEELGFKVGMTSGDYDSDDAWLKNYDI
IVSTYEKIDSLWRHNPSWLSEVDYFVLDEFHYLNDEERGPVVESVAIRAKRKNLLALSAT
ISNYEKIANWLNAIPVTTNWRPVPLREGVIVEGKKSYQVIFPNETIEIKGNDPIIAYTLY
VLEHGGQVLVFRNSRKMAESTAKKISSSMGLLSLPDKELLKVGEEIKNVEDAGSDEKEEL
YELVVRGVAFHHAGLSKGLREIIERAFRERKIKVIVATPTLAAGVNLPARAVIIGDFHRY
NRKILGYQEEISIMEYKQMAGRAGRPGFDKEGEAVIVVRNKKEAEKVFKKYILSPPEPIE
SRLGNESAFYSFLLGIISSEKKISEDDLEDYAMDTLLDKDVAEKYVKRGITWLRDNEFIA
GDDELVLTKFGKRVADLYINPFTAKVFKDYLTKSDKSCNIAYLHLVAYTPDGPTVSVTRS
ELEELVDEAPCPLFIEEPEDEDEFYNYVSALKVAMIINDWIEEVDEDVILSRYGIGSGDL
RSIIDTMDWLTYSGYNVAKVLDLKEHYDVLYTLNLRVKDGVKEELLDLVKIQGVGRKRAR
ILYNHGIKKPEDVVMNVDKVKSLLGQKIGEKIAKEAARLIAGNA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaattcacacctatagacaagcttaacttagatgagaggataataaagattctaaag
aagaaaggaatagaaaagctaaatccagtgcagacagatgcggttaatagcgggttacta
gaaggaaaaaggctattggttacttcgcctactggatcaggaaaaactttgatagcggag
ctaggaataatatctcacttgctttccgacggaggaaaggcggtttacattacgccactt
aaagcattaactgcagaaaaatataacgagctaaaagattgggaagagttaggatttaaa
gtagggatgacgtcgggggactacgacagtgacgatgcttggttaaaaaattacgatata
atagtatcaacatacgagaaaatcgattcattatggagacataacccatcttggttaagc
gaagtagattactttgtcctagatgaatttcactatttaaatgatgaagaaagaggacca
gtagttgaaagcgttgcaataagggcaaaaaggaaaaatttgttagcgttaagtgctaca
ataagtaactacgaaaagatagctaactggctaaatgcaataccggtaacaacaaactgg
agaccagtacctttgagagaaggagttattgttgaaggtaaaaagagttatcaagtaatt
tttcctaacgagacaatagaaattaaaggaaacgacccaataattgcttatacgctttac
gtattagagcacggagggcaagttttagtatttagaaattctagaaaaatggcagaaagt
actgcaaaaaagatttcctcatcaatggggttattatccttaccagataaggaattactt
aaggtcggtgaagaaataaagaacgtagaagatgccggaagtgacgaaaaagaagaactt
tatgaactagtagttagaggagttgcttttcatcacgctggactttctaaagggcttaga
gaaataatagaaagagcttttagagaaaggaaaattaaggttatagttgcaacgccaact
ttagctgcaggagttaatttacctgcaagggcagtaataattggggactttcatagatac
aataggaaaatactaggatatcaagaggaaatttcaataatggaatataaacaaatggca
ggaagagccggaaggccaggctttgacaaggaaggagaagcagtaattgtagtaaggaat
aaaaaagaggcagaaaaagtatttaaaaaatatattttatcccctccagaacctatagag
tcaagacttggcaacgaatctgcattttattccttcttattaggaataatttcttcagag
aagaaaatttctgaggacgatttagaagattacgcaatggataccttgcttgataaagac
gttgcagaaaaatatgtaaagagaggtataacttggttaagagataatgaatttatcgca
ggcgatgatgaactagtattaacaaaattcggcaaaagagttgcggatctttatatcaat
cctttcacggccaaggtttttaaagactatttgacaaagagcgataaaagttgtaacatt
gcttatttgcatttagttgcttacactccagacggacctacagtttcggtaacaagaagt
gagcttgaagaacttgttgacgaagctccctgccctttatttatagaagaaccagaagat
gaagacgaattttacaattacgtctctgctcttaaagtagcaatgataattaacgattgg
atagaagaagtagatgaagacgtaattttgagtagatacgggataggttcgggtgacctt
agaagtataattgacacaatggattggctaacttacagcggttataatgtagcaaaagtt
cttgaccttaaggagcattatgatgtcctttatacgcttaatctgagggtaaaggatgga
gtcaaggaagaattgcttgacctagttaagattcaaggcgttggaaggaagagggcaagg
attctttataaccatggaataaagaaaccagaggacgtggtaatgaacgtagataaagtc
aaatcgttattgggtcagaaaattggtgagaaaattgcaaaagaagctgcaagacttatt
gctggaaatgcttaa
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