Acidianus ambivalens: D1866_11325
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Entry
D1866_11325 CDS
T06309
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aamb
Acidianus ambivalens
Pathway
aamb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
D1866_11325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamb03019
]
D1866_11325
03009 Ribosome biogenesis [BR:
aamb03009
]
D1866_11325
04131 Membrane trafficking [BR:
aamb04131
]
D1866_11325
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamb04147
]
D1866_11325
Messenger RNA biogenesis [BR:
aamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
D1866_11325
Ribosome biogenesis [BR:
aamb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
D1866_11325
Membrane trafficking [BR:
aamb04131
]
SNARE
SNARE associated proteins
Others
D1866_11325
Autophagy
Aggrephagy
Other aggrephagy associated proteins
D1866_11325
Exosome [BR:
aamb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
D1866_11325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_22
TIP49
AAA_14
AAA_5
Vps4_C
AAA_33
nSTAND3
AAA_28
IstB_IS21
RNA_helicase
AAA_18
Mg_chelatase
AAA_25
AAA_lid_PRS2_C
AAA_24
ABC_tran
TsaE
NACHT
AAA_7
AAA_17
ATPase_2
Parvo_NS1
AAA_3
NPHP3_N
Zeta_toxin
DUF815
ATPase
Sigma54_activat
bpMoxR
PhoH
AAA_19
ATP-synt_ab
MazE_antitoxin
SCRL
Motif
Other DBs
NCBI-ProteinID:
QGR22499
UniProt:
A0A650CXA7
LinkDB
All DBs
Position
1985889..1988141
Genome browser
AA seq
750 aa
AA seq
DB search
MSAPIKLKVSEARQRDVGRKIARLSENLMTKLKIDAGDYLEIIGPSGSSLVQAMPAYDIN
DDEIRIDGYIRKAIGASIGDEVEIRKATVNKATKIVLAPTQPIRFDQSFVDYVKDQLMYK
PLVKGETIPIPIYTGVIELVVVNTQPSNYVFVSSETQLDIREEPVKAETTYTKVTWEDIG
DLEDVKERIREIVELPMKHPELFQRLGIEPPKGILLYGPPGVGKTLLARALANEIGAYFI
SINGPEIMSKFYGESEERLRQIFDEANKNAPSIIFIDEIDAIAPKREEVTGEVEKRVVAQ
LLTLMDGIKGRGKIIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKARKEILQVHTRS
MPLSDDVNLDDIAEMTNGYTGADLAALAKEAAMVALRRFLATTKVNLDQGQIPAELLKEL
KVTMNDFLEAMKSIQPTLLREVYVEVPKVRWSDIGGLEDVKQQLKEAIEWQIKFPDVFTK
SGIRAPKGVLLFGPPGTGKTMLAKAVATESGANFIAVRGPEVLSKWVGESEKAIREIFRR
ARQTAPTVIFFDEIDSIAPMRGFAHDSGVTERIVNQLLAEMDGITPLNKVVVIAATNRPD
ILDPALLRPGRFDRLIYVPPPDKKARLEILRVHTRNVPLAEDVNLETIAEKTEGYTGADL
EAVVREATMLMLREVSAVCEQKSREACTKDGKFVEECYNKEMRNCMNNFNSKVTMKHFEE
ALKIVSPSITKADIERYERLAKELKRSAVV
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctccaattaagcttaaagtatctgaggctagacaaagggatgtaggaagaaaa
atagctagactatcagaaaatttaatgacaaagttaaaaatagacgctggagattacttg
gagataattggaccctcgggctcttctttggttcaagctatgcctgcttatgatattaac
gacgacgaaatacggattgatggttatataaggaaagcaataggagctagcattggagac
gaagttgaaataagaaaggctacagtaaataaggctactaaaatagtattagcacctaca
cagccaataagatttgatcaaagttttgttgactacgtaaaggatcaactcatgtataag
ccattagttaaaggagagacaatccctataccaatttacactggtgtaatagaacttgta
gtagtaaatacacagccaagcaattacgtattcgtaagttccgaaactcaactagacatt
agagaagagccagtcaaagctgaaactacatacactaaagttacatgggaagatataggt
gatctagaagacgtcaaggaaagaatcagagaaattgttgaattacctatgaaacatcca
gaattattccagcgtttaggaatagaaccgcctaaaggaatactactttatgggccccca
ggagttggaaaaacgttgcttgctagagctttagctaatgaaataggggcatactttatt
tcaataaatggaccagaaataatgagcaagttttacggtgagagcgaagaaagacttagg
caaatatttgacgaagctaacaagaatgctccctcaataattttcattgacgaaatagat
gcaatagctcctaaaagagaagaagtaacaggagaagttgagaaaagagtagttgcacaa
ttgctaactttgatggacggaattaaaggaagaggaaaaataatagttattggtgcaact
aatagaccagatgcaatagatcctgcattaagaaggccaggaaggtttgatagggaaata
gaaataaggccaccagatacaaaggctagaaaagagatattacaagttcacactaggagt
atgcctctttcagatgacgtaaaccttgatgatatagcagaaatgactaatggttacaca
ggagctgatttagcagctttagctaaagaggcagcaatggttgcactaagaagatttcta
gctacaactaaagtaaacctagatcaaggacagattcccgcggaattattaaaggaatta
aaagttacaatgaatgactttctagaagcaatgaaatcaatacagccaaccttgcttaga
gaagtatatgtagaagtaccaaaggttagatggagcgatataggaggattagaagatgtt
aaacaacaattaaaagaggccatagaatggcaaataaagttcccagacgtttttactaaa
tctggaattagggctcctaaaggagttctattatttggcccgcctggcactggaaaaaca
atgttagctaaggctgtagcgactgagagtggagcaaacttcattgcagtaagaggtcca
gaagtattatcaaaatgggtaggagaaagcgagaaggcgataagagagatcttcaggaga
gcaagacaaacagctccaacagtaatattctttgatgagatagattctatagcacctatg
agaggttttgctcatgatagcggcgtaacagaaagaatcgttaatcaattattagcagaa
atggacggaatcacaccattgaataaagtcgtagttatagcagcaactaatagaccagat
atattagaccctgcattactaagaccaggaagatttgataggcttatatacgttcctccg
ccagataagaaagcaagattagagatacttagagttcatactagaaatgtgccgttagcg
gaggatgttaacttagagacaattgctgaaaaaaccgagggatatactggagcagattta
gaagcagtagtaagagaagcaacaatgcttatgttgcgtgaagtctctgcagtatgtgag
caaaaatccagagaagcctgcacaaaggatggcaaatttgtagaagaatgttataataag
gaaatgagaaattgtatgaataactttaacagtaaagttacgatgaaacactttgaagag
gctctaaaaatagtttctccaagcataactaaagcagatattgaaagatatgaaaggctt
gccaaggaattaaagaggagtgctgtagtatga
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