Alcaligenes ammonioxydans: FE795_03280
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Entry
FE795_03280 CDS
T07763
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
aamm
Alcaligenes ammonioxydans
Pathway
aamm00550
Peptidoglycan biosynthesis
aamm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aamm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FE795_03280 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aamm01002
]
FE795_03280 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aamm01011
]
FE795_03280 (dacB)
Enzymes [BR:
aamm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FE795_03280 (dacB)
Peptidases and inhibitors [BR:
aamm01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
FE795_03280 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
aamm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
FE795_03280 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QXX80641
LinkDB
All DBs
Position
714902..716305
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AA seq
467 aa
AA seq
DB search
MALVALLMVQGASLALAQALPPELASVWSASRLPQSSLSIVVDEADGPRLIGVNPQEPRN
PASVMKLVSTWAGLSALGPEYTWRTTLMAQDGLQVDEQGTLKGPLYIKAGGDPFLTVPQL
WDMLRELRLRGVKNLTEVIVDRSIFGNVTINPGDFDNAGDRPYNASPDAMMVGLGASRLV
FQPDAQARKWVAIIDPPLPGVRVQGEVEWSTATCPGSPVIGTQIQPEAGGMVVRVSGKAA
ASCGEFSVYRLVHSQTEFFDKLFRSLWRDLGGTLARDIKPGRVPGRAQAITWHDSQSLSD
LIRLVNKQSNNVMARTILLTVGAEMSGPGATVASGERAVMNILGRQGVNTSGWVVDNGSG
LSRNGRVTAGGMADMLKVAWRSNWMPEYISSFAISGVDGTVRSRLRDDEVQGRAHLKTGT
LRDSRALAGYVLGASGKRYIVVMMVNDERSASARPFFDAVVKWLAVR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctctggtagccttgctgatggtgcaaggcgcctcactggctctggcccaggcccta
cctcccgagttggcgtcggtctggagtgccagccgccttccccaatcgtctttgtcgatt
gtggtggacgaggcagatggcccgcgtctgattggcgtcaatccccaggagccccgcaac
cccgcttcggtcatgaagctggtcagcacctgggctggcttgtccgccttggggccggaa
tatacctggcgcaccaccttgatggcccaggacggcctgcaggttgatgagcagggcacc
ttgaaaggacccttgtatatcaaggcgggaggcgatccgtttctgaccgtgccgcagtta
tgggacatgttgcgtgaactccgtttgcgtggggtgaagaatctgaccgaagtgattgtg
gatcgttccatttttggcaatgtgacgatcaatccgggggattttgataacgcgggtgat
cgaccctataacgccagcccggatgccatgatggtcgggctgggagcctcccggctggta
tttcaacctgatgcgcaggcgcgcaaatgggtggcgattattgatccgccgctgccgggt
gtgcgcgtgcagggtgaagtggagtggtcgaccgcaacgtgcccgggctcaccggtgatc
ggcacccagattcaacccgaagccgggggcatggtggtacgcgtcagcggtaaggcggcc
gcctcttgtggcgaattcagcgtgtatcgtctggtgcactctcaaactgagtttttcgac
aaactgtttcgcagtctgtggcgcgatctgggcggcaccctggcgcgtgatatcaagcct
ggccgggtgccgggtcgtgcccaggccattacctggcatgattcgcagtccctgtctgac
ctgatccgtctggtgaacaagcaaagcaataatgtgatggcccgcaccatcttgctgacc
gtgggcgcggagatgagcggtcccggggccaccgtggccagcggcgagcgggcagtcatg
aacatattgggacgccagggcgtcaacaccagcggctgggttgtggacaatggctcgggc
ctgtcgcgcaacggacgggtgaccgccggcggcatggctgatatgttgaaagttgcctgg
cgctcgaactggatgcctgaatatatttcctctttcgccatctccggtgtggatggcacg
gtacgttcacgcttgcgggacgacgaggtgcaggggcgcgcccacctgaaaacaggcacc
ttgcgcgacagccgtgcgctggccggttacgtgctgggagccagcggaaagcggtatatt
gttgtcatgatggtcaatgacgaacgttctgcctctgcccggcccttttttgacgcagtg
gtgaagtggttggcagtgcgttaa
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