Alcaligenes ammonioxydans: FE795_03610
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Entry
FE795_03610 CDS
T07763
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aamm
Alcaligenes ammonioxydans
Pathway
aamm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FE795_03610 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamm03019
]
FE795_03610 (recQ)
03400 DNA repair and recombination proteins [BR:
aamm03400
]
FE795_03610 (recQ)
Enzymes [BR:
aamm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FE795_03610 (recQ)
Messenger RNA biogenesis [BR:
aamm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FE795_03610 (recQ)
DNA repair and recombination proteins [BR:
aamm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FE795_03610 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
SaeA_1st
Motif
Other DBs
NCBI-ProteinID:
QXX78191
UniProt:
A0ABX8SQ78
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All DBs
Position
788866..790692
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AA seq
608 aa
AA seq
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MAQSALEVLQEVFGYDSFRGSQHEIIETLIQGGDALVLMPTGGGKSLCYQIPALVRPGTG
VVVSPLIALMQDQVDALTELGVNAAYLNSTQDWQTAREVEREFLTGQLDLLYVAPERLLT
DRCLDLLARGQISLFAIDEAHCVSQWGHDFRPEYLGLDLLAQRWPGVPRVALTATATQLT
RVEIAQRLKLEQARHFVASFDRPNICYRIIEKNEVRKQLLSFIQEEHAGDAGIVYCLSRS
RVEDTAEFLCKNGIHALPYHAGLDAQQRAINQARFLREEGVVMVATIAFGMGVNKPDVRF
VAHIDLPKSVEGYYQETGRAGRDGEAATAWLAYGLQDVVQLHRMINQSQGDAAHRRQQGQ
ALDAMLGLCETISCRRQRLLAYFDQHIEPCGNCDTCLEAPQAWDGTVAAQKMLSTIYRLW
RERGQRFGAGHLIDILLGKLTDRVKEHEHDKLTVFGVGKDLTDQAWRGVLRQLLAHSLVT
VDPEGYGTLLLTEASREVLKGERTLMLRRETVTRGPAAHRVKGQAPAGPALDPDQQRRFE
ALRTWRAAIAREHGVPAYVIFHDATLREVAIRCPGSEADLEPITGIGVRKREAYGEALLR
CVQEFQTQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtcagcacttgaggttcttcaggaagtttttggttatgacagttttcgtggt
tctcagcacgagattatcgagaccctgatccagggcggtgatgccctggtcctgatgcct
accggtggcggcaagtccttgtgctatcagatccccgccttggtgcgccccggcactggc
gtggttgtctctccactgattgcgctgatgcaggatcaggtggatgcgctcactgaactc
ggtgtgaatgccgcctatctgaattccacccaggattggcagactgcccgtgaggtcgag
cgcgagttcctgaccgggcagctggatctattgtatgtggcgccagagcgcctgctcacc
gatcgttgtttggacttgctggctcggggccagatttccctgtttgccattgatgaggcc
cactgcgtgtcccagtgggggcacgactttcgccccgagtacctgggactggatttgctg
gcccagcgttggcctggcgtgccgcgcgttgccttgaccgcgacggctacccagttgaca
cgggtggagattgcccagcgcctgaagctggaacaggcacggcattttgtcgccagtttt
gatcgccccaatatctgttatcgcatcattgaaaaaaacgaggtgcgcaaacagctttta
agctttatccaggaagagcacgcaggagacgcaggcattgtgtactgtctgtcgcgctca
cgggtggaagatacggcggaatttctgtgtaaaaacggtatccatgccttgccctatcat
gccgggctggatgcgcagcaacgggctatcaaccaggctcgctttctgcgtgaggaaggg
gtcgtcatggtggcgaccattgcattcgggatgggtgtcaataaacccgatgtgcgcttc
gtggcccatattgatctgcccaaatcggtggaagggtattaccaggaaaccgggcgggca
gggcgcgatggggaagcggcaaccgcctggctggcgtatggcctgcaagacgtggtgcaa
ctgcatcgcatgatcaaccagtcacagggcgatgcagcccaccgccgccagcaagggcag
gcgctcgatgccatgctcggtctgtgcgaaaccatttcctgccgccgccagcgcttactg
gcttattttgatcagcacatcgagccttgcggcaattgcgacacatgcctggaagcgccg
caggcctgggacggcaccgtggcggctcagaaaatgttgtccacgatctacaggctgtgg
cgcgagcgaggtcagcgtttcggcgcagggcatttgatcgatattttgctgggcaagctg
accgatcgggtcaaggagcacgagcatgacaagctgacggtcttcggggtgggcaaagac
ctgaccgatcaggcctggcgaggcgtgttgcgtcagctgctggcccacagtctggtcacg
gttgatccggaaggttatggcactttgctgctgaccgaagccagccgcgaggtgctcaag
ggggaacgcaccctgatgctgcggcgcgaaaccgtaacacggggaccggcggcgcatcga
gtcaagggccaggcacctgccggtccggcgctggacccggatcaacaaaggcgtttcgag
gctttgcgtacctggcgggctgccatcgcgcgcgagcatggggtgccggcttacgttatt
ttccacgatgcgaccttgcgagaggtggcgatccgctgcccaggctcagaagctgatctg
gagccgattacaggcatcggggtgcgcaaaagagaggcctatggcgaggccttgctgcgc
tgcgtccaagagttccaaacgcagtaa
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