Alcaligenes ammonioxydans: FE795_05260
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Entry
FE795_05260 CDS
T07763
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aamm
Alcaligenes ammonioxydans
Brite
KEGG Orthology (KO) [BR:
aamm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aamm03016
]
FE795_05260 (truB)
Enzymes [BR:
aamm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FE795_05260 (truB)
Transfer RNA biogenesis [BR:
aamm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FE795_05260 (truB)
Prokaryotic type
FE795_05260 (truB)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
HTH_58
AstE_AspA_hybrid
Motif
Other DBs
NCBI-ProteinID:
QXX78482
UniProt:
A0ABX8SR18
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All DBs
Position
1162030..1162782
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AA seq
250 aa
AA seq
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MATRKRGQLIDGVLLLDKSDGMSSNHALQRARRTLDARKAGHTGTLDPFATGLLVCCFGR
ATKISATMLEADKAYEATLQFGQETDSGDLTGNVVSQAPAEFAGVTLEALEAVLPAFRGP
ITQVPPMYSALKRDGKPLYEYARQGIELEREARHLVIHDLQVQDFTPLSARLFVRCSKGT
YIRTLAQDIGRALGCFAHLTALRRTELGPFHIDDAYTLDGLQAMEDPMSALLAIESLPTE
ILPKKLQSEG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcgaaaacgcgggcagttgattgatggtgtgctgctgctggacaagtccgac
gggatgtccagcaaccacgctttgcagcgtgcccgccgcactctggatgcccgcaaagct
ggccatactggaaccctggacccgtttgcaacgggcctgctggtttgctgttttggccgg
gctaccaaaatttccgccacgatgctggaagcagacaaagcctatgaagctaccttgcag
tttggacaagaaaccgattcaggtgacttgaccggcaatgtggtgtcccaggctccggca
gagtttgccggcgtcaccctcgaggcgctggaggcagtattgcctgcctttcgaggaccc
attacgcaggtgccgcccatgtattccgcgctcaagcgcgatggcaagcccctgtatgaa
tatgcccgtcagggtatagagctggaacgtgaggcacgacatctcgtgattcacgatttg
caggtgcaagactttacgccgctgtcggcacgtttgtttgtacgttgcagcaagggaacc
tatatccggaccctggcgcaagatatcggacgtgctctggggtgttttgcccatctgacg
gccttgcgccggacagaattaggaccttttcatatcgacgatgcctacaccctggacggg
ttgcaggcgatggaagacccgatgtcggccttgctggccatcgagagcttgcctaccgag
attttgcccaaaaaacttcaatcagaaggatga
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