Alcaligenes ammonioxydans: FE795_05300
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Entry
FE795_05300 CDS
T07763
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aamm
Alcaligenes ammonioxydans
Pathway
aamm03030
DNA replication
aamm03410
Base excision repair
aamm03420
Nucleotide excision repair
aamm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aamm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FE795_05300 (polA)
03410 Base excision repair
FE795_05300 (polA)
03420 Nucleotide excision repair
FE795_05300 (polA)
03440 Homologous recombination
FE795_05300 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamm03032
]
FE795_05300 (polA)
03400 DNA repair and recombination proteins [BR:
aamm03400
]
FE795_05300 (polA)
Enzymes [BR:
aamm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FE795_05300 (polA)
DNA replication proteins [BR:
aamm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FE795_05300 (polA)
DNA repair and recombination proteins [BR:
aamm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FE795_05300 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FE795_05300 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QXX78489
UniProt:
A0ABX8SX72
LinkDB
All DBs
Position
1169676..1172393
Genome browser
AA seq
905 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAYHAMPDLRNAQGQPTGALYGVINMLRRLLQDYQADYMVCVFDA
KGRTFRDDLYDQYKANRPSMPDDMAVQIEPLHRAVRAMGWHLICQSGVEADDIIGTLSRL
AAENGIETVVSTGDKDLAQLVNEHVRLVNTMSNEKLDVDGVISKYGVRPDQIVDYLMLIG
DTSDNVPGVPKVGPKTAAKWLGEYGSLDELLRHADKIKGVAGQNLRDFSANFEMTRQLVT
VKLDCEVPGFTGDFEALEPEPRDKATLQDIYETYGFRTWLRELTQDPDRVPAQDSRVEAQ
TPQAPTELDYQTVTTKEQLSSLLSLLEKAQLVALDTETTSLDPLMARLVGLSVSVKAGQA
FYVPVAHRGSLDLEQLDKDYVLQTLRPWLENAQAAKVLHNAKYDTHVLLNEKVHLRGIQD
DTMLQAYVLQSHKRVSMDELALQWLGLKGTSYEDICGKGAKQIGFDEVEISVASHYACED
ADYTLRLHQCLRPQLAQETGLERIYRLEVQASEVLTIVERNGVKIDVSTLARQSHELGQK
MLELENKAYELADQPFNMNSPKQVGEILFGKLGIPVVRKTASGAPSTDEDVLTRLAQDYP
LPQVLLEYRGLAKLKSTYTDKLPKMVNPDSGRVHTRYSQAAVITGRLASSDPNLQNIPVR
TAEGRRVRAAFVSELGKVVSADYSQIELRVMAHVSGDANLQQVFEQGGDVHTATAAEIFG
IQTQDVSSDQRRAAKAINFGLIYGMGEFGLASNLGITRDAARAYIDRYFARYPGVASYMT
RIKAQAHEQGYVETVFGRRLWLPELKGAKGPRMAGAERAAINAPMQGTSADLIKMAMVAV
QRWLEDNKLRTQMVMQVHDELVFDVPEDELDTLREHLPGLMCNVAKLDIPLVAEVGVGDN
WEQAH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttgttgctcgttgatggttccagctatctgtatcgagcgtaccatgcg
atgcccgatctgcgaaacgcgcaaggccagcctacaggcgctttgtacggggtcatcaat
atgcttcgtcgcctgctgcaggattatcaggcggactatatggtatgcgtgtttgatgcc
aagggccgcaccttccgggacgatctgtacgatcaatacaaggcaaaccggccttccatg
cccgatgacatggcggtgcaaatagaaccgcttcacagagccgtgcgggccatgggctgg
catctgatttgccagtccggcgtagaggctgacgacatcatcggcacgctgtctcgcctg
gccgctgaaaacggcattgagacggtggtctcgaccggggacaaggacctggcccagttg
gtcaatgagcatgtccggctggtcaacaccatgagtaacgagaagctggatgttgacggg
gtgatcagcaagtatggggtgcgtcccgatcagatcgtcgactatttgatgttgattggc
gacacctcggataatgtccccggtgttcccaaagtaggccccaagaccgccgccaaatgg
ctgggggagtacggcagtctggacgaactgttgcgtcacgccgacaaaatcaaaggtgtg
gcggggcagaacctgcgcgacttcagtgccaactttgaaatgacgcgccaactggtgacc
gtcaagctcgattgcgaggtacctggttttacgggggatttcgaagctctggaaccggaa
ccgcgtgacaaggccactttgcaggacatttacgagacttatggttttcggacctggctg
cgcgagttgacgcaggacccggatcgtgtgcctgcacaggacagccgcgtcgaagcgcaa
acgccgcaggcgccgacggagctggattaccagaccgtcaccaccaaggagcaattgagt
tccttgttaagcctgcttgaaaaggcgcaactggtggcactggataccgaaactacttcc
ctggaccccttgatggcgcgactggtgggtctgtcggtctcagtcaaggcaggccaggct
ttctatgttcccgtcgcacaccggggttcgctggacctggagcaactggacaaagactat
gtattgcagaccttgcggccctggctggagaatgcgcaggcggccaaggtcttgcacaac
gccaaatacgatactcacgtcctgctcaatgagaaggtccatttgcgcggtattcaggac
gacaccatgttgcaagcctatgtcctgcagtcgcacaagcgcgtcagcatggacgagctg
gccctgcaatggttggggctgaaaggcacctcgtatgaggacatttgcggcaagggcgcc
aagcagattggctttgatgaagtcgagatctcagtggcttcccactatgcctgcgaagat
gcagattacaccttgcgactgcatcagtgtctgcgtcctcagctcgcccaggagacaggg
ctggagcgcatttatcggctggaggtgcaggcctcggaagtgctgaccattgtggagcgc
aacggcgtcaaaatcgatgtgtccaccctggcgcgtcaaagtcacgagctggggcagaaa
atgctggagctggagaacaaggcctacgagctggctgatcagccctttaatatgaattca
cccaagcaagtcggtgagatcctgtttggcaagctgggtattcccgtcgtgcgtaaaacg
gccagcggcgcgccgtccaccgatgaggatgtattgacccgtctggcccaggactacccc
ttgccccaggtgttgctggagtaccggggcttggccaaactcaagtccacgtataccgac
aaattgcccaaaatggtgaatccggacagcgggcgggtgcatacgcgttattcacaggcc
gccgttattacagggcgtctggcctcctcggatccgaatctgcaaaatattcctgtacgt
acggcagagggtcgtcgtgtccgggctgcgtttgtctccgagttgggcaaggtggtgtct
gctgactattcccagattgaattgcgcgtgatggctcatgtttcaggggacgccaatttg
cagcaggtgttcgagcagggcggtgatgtacacactgccacggccgccgagattttcggt
attcagacccaggacgtcagttccgatcagcgtcgtgccgccaaggccatcaattttggc
ttgatttacggcatgggggaatttggtctggccagcaatctgggcatcacccgtgatgcc
gctcgcgcttacatcgaccgctactttgcgcgttatccgggtgtggccagctacatgact
cgtatcaaggcccaggctcacgagcagggttatgtggaaactgtgtttggccgacgcttg
tggctgccagagttaaagggagcaaaagggcctcgcatggcgggcgcagagcgtgctgcc
attaacgcgcccatgcaaggcacctcggctgatctgatcaagatggcgatggtcgcggtg
caacgctggctggaagacaataagctgcgtacacaaatggtgatgcaggtgcacgacgaa
ctggtgtttgatgtgcccgaagacgagttggacaccttgcgtgagcatctgccggggctg
atgtgcaatgtggccaagctggatattccactggtggcggaggtaggggtgggcgacaac
tgggagcaggcccactaa
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