Alcaligenes ammonioxydans: FE795_05510
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Entry
FE795_05510 CDS
T07763
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aamm
Alcaligenes ammonioxydans
Pathway
aamm03030
DNA replication
aamm03430
Mismatch repair
aamm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aamm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FE795_05510 (dnaE)
03430 Mismatch repair
FE795_05510 (dnaE)
03440 Homologous recombination
FE795_05510 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamm03032
]
FE795_05510 (dnaE)
03400 DNA repair and recombination proteins [BR:
aamm03400
]
FE795_05510 (dnaE)
Enzymes [BR:
aamm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FE795_05510 (dnaE)
DNA replication proteins [BR:
aamm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FE795_05510 (dnaE)
DNA repair and recombination proteins [BR:
aamm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FE795_05510 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HHH_3
SSB
Motif
Other DBs
NCBI-ProteinID:
QXX78529
LinkDB
All DBs
Position
1216614..1220090
Genome browser
AA seq
1158 aa
AA seq
DB search
MSEITPSFVHLRSHSEFSVVDGIARIPEMIKKAQAYGQPALALTDLSNLFGQIKFYTSAR
KAGLKAIMGCDIWLQNEEDREKPARLLLLVQNEAGYLSLCDILTRAWLGNQYKGRAEVQR
AWLKECSGLIALSGGRMGDVGQALGDGNLELARECAHHWESLFPGAFYIELQRSGADGDE
LYVQAAMRLAAELDLPVVATHPIQFIAPEDFRAHEVRVCIAEGEQLANPKRVKRFTPEQY
FLSTDEMQQRFADVPAALENTLEIAKRCNLELELGKPYLPDFPTPEGMSLGDFLIQQAQQ
GLEKRLLQLYPDPAEREKQRPTYEERLSWECNTIISMGFPGYFLIVADFINWGKHNGVPV
GPGRGSGAGSLVAYSMGITDLDPLRYDLLFERFLNPERVSMPDFDVDFCQDNRERVIDYV
KQKYGRQAVSQIATFGTLGAKAVVRDVGRVLELPYSLCDGLSKLIPFNPADPWTLERALA
DEPAFRERYENDEEVKALIDLARPLEGLTRSVGMHAGGVLIAPGKLIDFCPLYAQPGPDA
NAVSQYDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNADKRDFDIMALPLDDEASY
KLLCEGNTTAVFQLESRGMKELLRSLRPSTFEDIIAMLALYRPGPLESGMVVDFVNRKHG
RAEVDYFHPDLESTLSSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEEMAK
HRVLFQEGAVKKGHDPELAVKLFDLMEKFAGYGFNKSHSAAYALIAYQTAWLKAHHPAEF
LAATLLSDMDDTDKVQIFWKDALANGVEVLPPDINASNYRFEPVKDSYTEKGLPPRTMRY
GLGAVKGTGQAAVEAIVEARKQGGPFTSLFDFCRRVDRHQVNKRTIEALVRAGAFDSIDD
NRAALLASIGAATEAAEQAERSANQSSLFDDDSNDIVEGEVAKVAPWSLQDRLRQEKTAL
GFYFSGHLFDAWRDEVRRFAPTPLARLEASRSAQWFAGVLSAVRVRMTRRGKMLYAMLDD
GSAQLEVAIFNELFEEHRQRLKEDQLVIIQGKVSNDDYTGGLRINADAIFDLQLAREARA
SCLSIGLNHHADAQRLHSLLAPHRAQEQGGVPVEVQLQRPDYECVVQLGAQWRVRLADSL
LEQLEAWDATTDVEISYR
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatcaccccttcctttgtccatttgcgatcccactcggaattttccgtggtg
gacggcatcgcccgtatccccgaaatgattaaaaaagcgcaggcctatggtcagcccgcg
ctggccttgacggacctgtccaatttgttcgggcagatcaagttctatacctcggcacgc
aaagccgggctgaaagccatcatgggatgtgatatctggctgcagaacgaggaagaccgt
gaaaaaccggcgcgcttgctgctgctggtgcaaaacgaggcgggttatttaagtctgtgt
gatattttgactcgagcctggctgggcaaccagtacaaggggcgcgccgaagtgcagcgt
gcctggcttaaggagtgcagcggtttgattgcgctgtccggtggccgcatgggggatgtc
ggccaggccctgggcgatggcaatctggagttggctcgtgagtgtgcccatcactgggag
tccttgttccccggcgctttttatatcgaattgcagcgcagtggcgcggacggtgatgag
ctatacgtgcaggccgccatgcgtctggctgcggagctggacttgccggtcgtggccacg
cacccgattcagttcattgcgccagaggactttcgggctcacgaagtgcgggtgtgtatc
gccgaaggcgagcagttggccaatcccaagcgggtcaagcgttttacgccggagcagtac
tttctgagtacggatgaaatgcagcagcgttttgccgatgttcccgctgcactggagaac
acgctggagattgccaagcgttgcaatctggaactggaattgggcaagccttatctgccc
gatttcccaacgcctgagggtatgtcgctgggcgactttctgattcaacaggcccagcaa
gggctggaaaagcgtttgctgcagctctatcccgatccggccgaacgcgaaaaacagcgt
cccacttacgaggagcgcctctcttgggaatgcaacaccatcatttccatgggttttccg
ggctacttcctgatcgtggcggactttatcaactggggcaagcacaatggcgtgcccgtg
gggccgggtcggggatcgggggcgggctccctggtagcgtacagcatggggattaccgat
ctggaccccttgcgctatgacttgctgttcgaacgtttcctgaaccctgaacgggtctcc
atgcctgactttgacgtggacttttgtcaggacaatcgcgagcgcgtcattgattacgtc
aaacaaaaatacggtcggcaggccgtcagccagatcgcgacttttggcaccttgggtgcg
aaagcggtggtgcgtgacgtgggccgggtgctggagctgccctacagcctgtgtgatggc
ttgtccaagctgatcccgttcaaccctgccgatccgtggacgctggagcgggcgctggcc
gacgagcccgcctttcgcgagcgttacgaaaatgacgaggaagtcaaagcgctgatcgat
ctggcccgtccgctggaggggctgacgcgcagtgtggggatgcacgccgggggcgttttg
attgcgccgggcaagttgatcgacttttgccccctgtacgcgcagccaggcccggacgcc
aacgccgtatcgcaatatgacaaggacgatgtggaggctgccggtctggtcaagttcgac
tttttgggcttgcgcaacctgaccattctggattgggcggtgcgctatgtgcgccagttc
aacgcagacaagcgcgactttgacatcatggcgctgccattggatgacgaggcttcctac
aagctcttgtgcgaaggaaataccacggcggtgttccagctggaatcgcggggcatgaaa
gagctgctgcgcagtttgcggccctccacctttgaagacatcatcgccatgctggctttg
tatcgcccgggtccactggagtcgggcatggtggtggatttcgtgaaccgtaaacacggt
cgcgccgaggtcgattatttccaccctgatctggaaagcaccctgagcagcacttacggg
gtcattgtttaccaggaacaggtgatgctgatctcgcagatcatcggtggctactcattg
gggggcgccgacttgctgcgccgcgccatgggcaagaaaaagcccgaggagatggccaag
catcgtgtgctgttccaggaaggggccgtcaaaaaaggacacgacccggaactggcggtc
aagctgtttgacctgatggaaaagtttgcaggctacggctttaacaagagtcactctgcc
gcctatgcgctgatcgcctatcagacggcgtggctcaaggcccaccatcccgccgagttt
ctggccgccaccttgttgtccgatatggacgatacggacaaggtacagattttctggaaa
gacgccctggccaatggcgtggaagtactgccacccgatatcaatgcctccaattaccgg
tttgagccggtcaaggatagttataccgaaaaaggcctgccgccccgcaccatgcgctat
ggtctgggggcggttaagggaaccggccaggcggcagttgaggccattgtggaggctcgc
aaacaaggcggtccttttaccagcctgtttgatttctgccgtcgggtggatcgtcatcag
gtcaacaagcgcacgattgaggcgctggtgcgggcaggcgcctttgactcgatcgacgac
aatcgggccgccttgctggccagtattggtgccgccaccgaggccgcggagcaggctgaa
cgcagtgccaatcagtcctctttgtttgacgacgattccaacgatattgtggaaggcgaa
gtggccaaagtggccccgtggagtctgcaggatcgcttgcgccaggaaaagacggcactg
ggtttttacttcagcggtcacttgtttgatgcctggcgcgatgaagtgcgccgttttgcg
cccacaccactggcccgtctggaggcatcacgcagtgcgcagtggtttgcaggagtgctc
tcggccgtgcgtgtgcgcatgacccgtcgtggcaagatgctgtatgccatgctcgatgat
ggctcggcccagttggaagtcgccattttcaatgagctgtttgaagagcatcgtcagcgt
ttgaaagaggatcagttggtcatcattcaaggcaaggtcagcaatgacgactataccggc
ggcctgcgtatcaatgcagatgccatttttgatttgcaactggctcgcgaagcgcgcgcc
agttgtttgagcatcgggttgaatcatcatgctgacgcgcagcgtctgcacagtcttctg
gccccgcaccgtgctcaggagcagggcggcgtgccggttgaagtgcagttacagcgcccc
gattatgagtgtgtggttcagttgggagcccaatggcgcgtacgtctggccgactccctg
ctggagcaactggaagcatgggacgcgaccacggatgtggagatcagctaccgatga
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