Alcaligenes ammonioxydans: FE795_07205
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Entry
FE795_07205 CDS
T07763
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aamm
Alcaligenes ammonioxydans
Pathway
aamm03410
Base excision repair
aamm03430
Mismatch repair
aamm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aamm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FE795_07205 (recJ)
03430 Mismatch repair
FE795_07205 (recJ)
03440 Homologous recombination
FE795_07205 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamm03400
]
FE795_07205 (recJ)
DNA repair and recombination proteins [BR:
aamm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FE795_07205 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FE795_07205 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FE795_07205 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
VRP3
Motif
Other DBs
NCBI-ProteinID:
QXX78819
UniProt:
A0ABX8SY43
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All DBs
Position
complement(1590822..1592546)
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AA seq
574 aa
AA seq
DB search
MVTPILKTRPVQEAASQALKQAGIHDLMARLLASRGVTDAAQIDPAWRNLIPPAMLTQAR
EAAALLADAIARRDRMLIIADYDCDGATACAVGLRALRSMGAIVDFLVPNRFETGYGLSP
AVVELAEQHPSGKPDLLITVDNGIASIEGVEAAHQAGMKVLITDHHLPGDELPDALAIVN
PNQPGCAFPSKNLAGVGVIFYLMLALRAELRQRGILDANGGPRLNELADLVALGTVADVV
SLDANNRLIVTQGLERMRKGQMQVGLRALFQVAGRDPRQASAFDLGFALGPRINAAGRLA
DMALGIRCLITDDEDEAAHLARELEEMNQDRRSIEQTMREEALRAAELAEPETSATVCVY
HPEWHQGVVGLVASRLKEKYWRPTLAFAQGDEGEIKGSGRSIPDVHLRDALDLVSKRYPG
LILKFGGHAMAAGLTIEEDNYDVFVQAFDEAVQELTGRFQFDPVIETDGSLEPEHINITV
AGMLQKQVWGAGFPAPVFRDRFFVRQQRLLKNKHLKLNLERNGEYFDAIWFNRDALLPEH
IEAAYRLDQNEWNGNVSVQFIIEFAQDCPINPAG
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
gtggtcacccctatcctgaaaacccgtcccgtccaagaagccgccagccaagccctgaaa
caggccggaattcacgatttaatggcccgcttgctggcctcccgaggagtgacagacgcc
gcgcagattgatccagcctggcgcaatctgattccacctgccatgctgacacaggcccgt
gaggccgctgccctgctggccgatgccattgcccgtcgtgatcgcatgttgatcatcgcc
gactacgattgtgatggtgccacggcctgcgccgtaggcctgcgcgccctgcgcagcatg
ggagccattgtggactttctggttcccaaccgctttgaaaccggctacggcctgtcccca
gcggtcgtcgaactggccgagcaacacccctcgggcaagccggatctgctcatcaccgtc
gataacggcattgccagtattgagggcgtcgaggctgcccatcaggcaggaatgaaggtg
ctgatcaccgatcaccacttaccgggcgatgagttgcccgacgcgttggcaattgtgaat
cccaaccagcccggctgcgcctttccctccaaaaacctggccggcgtcggggtcattttt
tacctgatgctggccttgcgtgccgagctgcgtcaacgcggcattcttgacgccaatggt
ggcccacgcctgaacgagctggccgatctggtggcgttgggtacggtggccgacgtggtt
agtctcgatgccaacaatcgcctgattgtcacccaggggctggagcgcatgcgcaaaggc
caaatgcaagtgggactacgggcgctattccaggtggccggtcgtgacccccgccaggcc
agtgctttcgatctgggttttgccttgggcccacgtatcaatgccgcgggtcgactggcc
gacatggccttggggatacgctgcctgattacggacgatgaagacgaggccgcccattta
gctcgcgaactggaggagatgaatcaggatcgtcgatcgattgagcaaaccatgcgcgaa
gaggcactgcgtgcagctgaactggccgagccggagaccagcgccacggtctgcgtttat
catcctgaatggcaccagggcgtggtgggtctggtggcctcccgcctgaaagaaaagtac
tggcgcccgaccctggctttcgcccaaggtgatgaaggcgaaatcaaaggctcaggccgc
tccattcccgacgttcatctgcgcgatgcactggatctggtctctaaacgctatcctggc
ctgattctgaagtttggcggccacgccatggcagccgggctgacgattgaagaggacaat
tacgatgtctttgtgcaggcttttgatgaggccgtgcaagagctcactggtcgcttccaa
tttgaccccgtcattgaaacagacggctccctggagcctgagcacatcaatatcacggtg
gctggaatgctgcaaaaacaagtctggggggcaggtttcccagcacccgtattccgcgac
aggttctttgttcgccagcagcgcctgctgaaaaacaagcatttgaaactgaacctggag
cgtaacggcgaatacttcgatgccatctggttcaatcgtgacgccttgctgcccgagcat
atcgaagccgcttatcgcctggatcaaaacgaatggaatggcaatgtcagtgtgcaattc
attattgaattcgctcaggactgccccatcaacccagcgggctga
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