Alcaligenes ammonioxydans: FE795_12855
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Entry
FE795_12855 CDS
T07763
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
aamm
Alcaligenes ammonioxydans
Pathway
aamm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aamm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FE795_12855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamm03000
]
FE795_12855
Transcription factors [BR:
aamm03000
]
Prokaryotic type
Helix-turn-helix
IclR family
FE795_12855
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Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_20
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
QXX80796
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Position
2788229..2789002
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AA seq
257 aa
AA seq
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MEEKKLVPAVVRAVTVLDELAASPEPLSFTDLVKRLGMPKSSLYGLCTTLLDLHLIRKLE
NGSFTLGTHVMGWANAFLSQLDLTQEFFAAWDDMRVLPEETITLSILDGEDVVYIACRNG
TRPLGFTFRAGMRLPAVYTATGKAMLSTLPAPELDQALNHPWPDPLTAHGPRNKEELMVE
LSDVQRLGYSVDACGVRDGMHCFGAAVFDSNNRAAVAGVAVSLLTQEADEAAQRRAGEAM
RKLANRLSERLGASRKA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtggaagagaagaaactggttccggctgtagtacgcgcagtcaccgtactggacgaattg
gcggcctcaccggagcccctgtcatttacggacctggtcaaacgtctgggtatgcccaaa
agttccctgtatggtctgtgcaccacgctactggatctgcacctgatccgtaagctggaa
aatggcagtttcaccttgggcacacacgtcatgggctgggccaatgcgttcctgtcccag
ctggatctgacacaggaattttttgccgcctgggacgacatgcgcgtcctgccggaagag
acgattaccctgtccattctggatggtgaagatgtggtctacattgcctgtcgaaacggg
acccggccgctgggtttcaccttccgcgccggcatgcgcctgccggcggtctacaccgcc
accggtaaagccatgctcagcacgttgccagcgccggaactggaccaggccctgaatcat
ccctggcccgaccctttgacggcgcacggcccgcgcaacaaggaagaattgatggtggag
ctcagcgacgtgcagcgcctgggctattcggtggatgcctgtggcgtacgggatggcatg
cactgttttggagccgcggtgttcgactccaataaccgtgctgccgtggccggggtcgcg
gtcagtttgctcacccaggaagcggacgaggcagcccagcgccgtgcaggggaagccatg
cgtaaactggccaatcgcctctcggagcgtctgggcgcatcgcgcaaagcataa
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