KEGG   Alcaligenes ammonioxydans: FE795_14030
Entry
FE795_14030       CDS       T07763                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
aamm  Alcaligenes ammonioxydans
Pathway
aamm03030  DNA replication
aamm03430  Mismatch repair
aamm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aamm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FE795_14030 (dnaQ)
   03430 Mismatch repair
    FE795_14030 (dnaQ)
   03440 Homologous recombination
    FE795_14030 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aamm03032]
    FE795_14030 (dnaQ)
   03400 DNA repair and recombination proteins [BR:aamm03400]
    FE795_14030 (dnaQ)
Enzymes [BR:aamm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FE795_14030 (dnaQ)
DNA replication proteins [BR:aamm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FE795_14030 (dnaQ)
DNA repair and recombination proteins [BR:aamm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FE795_14030 (dnaQ)
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: QXX80025
UniProt: A0ABX8SVF5
LinkDB
Position
complement(3051827..3052552)
AA seq 241 aa
MRQIILDTETTGLEPREGHRIVEVGGVELFNRKLTGRHLHLYLNPDRDSDPEALAIHGLT
TEFLAGHPRFKDVVDQVLDFVQDAEVIIHNASFDTRFLDAELERVGKGPFSEYCASITDS
LLVAREMHPGKRNSLDALCERYGISNSHRTLHGALLDSELLADVWLAMTRGQDALLMDFD
ESDGQGGQGSDLSLGKFDPSVLKVLRASPADQAEHEKYMDLLEKQNKKPPMWREMLQPVT
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgtcaaattattctggatactgaaaccaccggtctggagccgcgtgaaggacaccgt
atcgttgaagtgggtggggtggagctgttcaaccgcaaattgactggccgccatttgcac
ctgtatctgaacccggatcgggactccgatcccgaagcgctggccattcatggtttgacc
accgagtttttggccgggcatccacgtttcaaggatgtggtcgaccaagtgctggatttt
gtgcaggatgcagaggtcattattcataatgcctcgttcgacacgcgctttctggatgcc
gaactggaacgagtcggtaaagggcctttctcggagtattgcgccagcatcaccgactcc
ttgctggtggcccgggaaatgcaccccggcaagcgtaactccctggatgccttgtgcgag
cgctacggtatttccaactctcaccgcaccttgcacggcgctttgctggactcggaattg
ctggccgatgtctggctggccatgacgcggggtcaggatgccttgttgatggactttgac
gagtccgatgggcaaggaggacagggcagcgatttgagcctgggcaagtttgatcccagc
gtgttgaaagtgctgcgcgcttcgccagccgatcaggccgagcatgaaaaatacatggac
ctgctggaaaagcagaacaaaaagccacccatgtggcgcgagatgctccagccagttacc
gaataa

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