Alcaligenes ammonioxydans: FE795_14480
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Entry
FE795_14480 CDS
T07763
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aamm
Alcaligenes ammonioxydans
Brite
KEGG Orthology (KO) [BR:
aamm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aamm03016
]
FE795_14480
Enzymes [BR:
aamm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FE795_14480
Transfer RNA biogenesis [BR:
aamm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FE795_14480
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
UPF0158
Motif
Other DBs
NCBI-ProteinID:
QXX80099
UniProt:
A0ABX8SWK2
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All DBs
Position
3157768..3159657
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AA seq
629 aa
AA seq
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MYVLFEDSGNFKAEKIFSDSDTTMQVESASGKRSKIKKNSVLFTFDQPAPAELLEKAQAL
ADSLDINFLWECAPQDEFEAAELAQEYFGHPPSAIEKTGTIFALHSAPAYFHRRGKGLYR
PAPPEILQAALAAIEKKRLQQEQIQTWAEQMIKGELPTEVAAKAGTFLTQPDKNTLEWKA
FDQAQKELGVSTEKLLLSLGAWSNPLTLHQHRFLTAHFPKGTGFPAICLQNWGQDLPEAD
VIAYSVDDANTIEIDDALSVQHPEPGRLRVGVHIAVPSLAMSRGNEIDQIARNRMATVYT
PGYKIPMLPPELIAHFSLDQGQTRPALSLYVDADISTGEILSHQTRLERITVAGNLRQHE
LDPLISEAALADENAELPYAQWLRPLWNFSRQLSAQREAVRGKPENNNRVEYSFELEGPH
DDPNSIIRLVPRVRNAPLSLLVAEYMILANQLWGGLLAEHNVPGIYRSQQFMRTRMSTTP
GPHESIGVPQYIWSTSPLRRYVDLINQGQILAAAQHGISARLAAPFQPKDADLYAIIGAF
ESQYTQWADYQSSLERFWCLRWLQQNDIKQVQASFIKEDLVRLTNAPLVLHVPGLPALER
GQEVTLDLLSFDELALTVEARLRSVATAD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtcctttttgaagacagcggtaatttcaaagcagaaaaaatattttctgacagc
gataccaccatgcaggtggaatccgcgtctggcaagcgcagcaaaatcaagaaaaacagc
gttctgtttacattcgatcagccagcccctgcagagcttctggaaaaagcccaggccctg
gccgactcgctggatatcaatttcttgtgggaatgcgcaccgcaggacgaatttgaggcg
gccgaactggcccaggagtattttggccaccctcccagcgccatcgaaaaaaccggcacc
atttttgctctgcacagcgcaccggcctacttccatcgtcggggcaagggactgtatcgc
cccgctcccccggaaatcctgcaagccgctttggccgccattgaaaagaagcgtctgcag
caagaacagattcaaacctgggccgagcagatgatcaagggcgagttgccaaccgaagtg
gcagccaaagcggggaccttcctgacccagccggacaaaaacacgctggagtggaaagcc
ttcgatcaagcccagaaggaactgggtgtcagcaccgagaaactgctgctctcgctgggc
gcctggtccaaccccctgaccttgcatcagcatcgctttttaaccgctcattttcccaaa
ggcaccggctttccggcaatctgcctgcaaaactggggccaggacctgcccgaagcggat
gtcattgcgtactccgtggacgatgccaatacgattgagattgacgacgccttgtcggtc
cagcatcccgagccgggccgactgcgggtgggtgtccacattgccgtaccgtctttggcg
atgagccgtggcaatgaaatcgaccagatcgcccgcaatcgcatggcaacggtttacacg
ccaggctacaagattcccatgctgccgcctgagctgatcgcgcatttctcactggaccag
ggtcaaacacgccctgccttgtccctgtatgtggatgccgacatcagcacaggtgaaatc
ctgtcccaccaaacccgcctggaacgcatcaccgtggcgggcaacctgcgccagcatgaa
ctggacccgctgatcagcgaagcggccctggccgacgaaaacgccgagctgccttatgcg
cagtggctgcgtccgctgtggaatttctcccgccaactgtcggcccagcgcgaggcagta
cggggcaaaccggaaaacaacaaccgggtggaatacagctttgaactggaaggcccgcac
gatgacccgaattccatcatccggctggtgccgcgtgtgcgcaatgctccgctcagcctg
ctggtggccgaatacatgatcctggccaatcagctctggggtggcctgctggccgaacat
aatgtgcccggtatctatcgttcccagcaattcatgcgcacgcgcatgtccaccacgccc
ggcccgcacgagtccattggtgtaccgcaatacatctggtccacctcgccgctgcgccgc
tatgtggacctgattaatcaaggacaaatcctggcggccgcccagcatggcatctcggca
cgtctggcagcccctttccagcccaaggatgcagacctgtatgccattattggcgccttt
gaatcgcaatacacccagtgggcggattaccagtcctctctggagcgtttctggtgcctg
cgctggttgcagcaaaacgacatcaagcaagttcaggccagcttcatcaaggaggatctg
gtgcgcttgactaacgcccctctggttctacacgttcctggcctgccggcgctggagcga
ggtcaggaggtgaccctggatctgctgtcgtttgacgaactggccttgaccgtagaggcc
cgtttgcgctcggtcgcgacggccgactga
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