Alcaligenes ammonioxydans: FE795_16295
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Entry
FE795_16295 CDS
T07763
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
aamm
Alcaligenes ammonioxydans
Brite
KEGG Orthology (KO) [BR:
aamm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamm03021
]
FE795_16295 (rpoH)
Transcription machinery [BR:
aamm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FE795_16295 (rpoH)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
NMO
HTH_AsnC-type
HTH_PafC
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
QXX80426
LinkDB
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Position
complement(3561651..3562547)
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AA seq
298 aa
AA seq
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MTQQANALALASGNELVAAVSNPGALGTIEAYISAVNRLPMLSAERETELGQRLRDQDDL
DAARELILSHLRLVVSIARQYLGYGLPHADLIQEGNVGLMKAVKRFDPDRGVRLVSFAVH
WIKAEIHEYVVRNWRMVKVATTKAQRKLFFNLRRMRPDGQTLDTAQVDAIARELDVRPQD
VSEMEVRLSGHDMALEAPTNDDDDNFAPISYLSDEGHEEPSRVLERRAQDMLEGSGLEEA
IDTLDERSQRIVRARWLQDDGGATLHDLAAEFGVSAERIRQIEVAAFKKLRVALSAAV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacaagcgaacgctttggccctggcgtctggtaatgaactggtcgccgccgtg
tctaatccaggcgcactggggacgatcgaagcgtatatctctgccgttaaccgcctgccc
atgctcagcgccgagcgcgaaaccgagctgggtcagcgcctgcgcgaccaggatgatctg
gatgccgcgcgtgaattgattttgtcgcacctgcgtctggtggtctccattgcccgtcaa
tatctgggttatggattgccccatgccgacctgatccaggagggcaatgtgggcctgatg
aaagccgtcaagcgctttgatcccgatcgcggggtgcgtttggtgtcgtttgccgtgcat
tggatcaaggccgagattcatgaatacgtcgtgcgcaactggcgcatggtgaaagtggcc
acgaccaaagcccaacgcaaactgtttttcaacctgcgtcgtatgcgtccggacggacaa
accttggataccgcgcaggtcgatgcgatcgcgcgtgagttggacgtgcgcccacaggac
gtcagcgagatggaagtgcgcctgtcgggtcacgatatggctctggaggccccgaccaac
gacgatgatgacaatttcgcgcctatttcctatctgtccgatgaaggacacgaggagccg
agccgcgtgctggagcgccgcgctcaggacatgttggaaggcagtggcctggaagaggcg
atcgacacgttggacgagcgttcgcagcggattgtgcgcgcacgctggttgcaggatgat
ggcggtgccactttgcacgatctggctgctgagtttggcgtgtcggccgagcgtatccgt
cagattgaagtggccgcgttcaaaaagctgcgcgtggcgctgtctgctgccgtgtaa
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