Arvicola amphibius (Eurasian water vole): 119799558
Help
Entry
119799558 CDS
T08327
Symbol
Lrit1
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119799558 (Lrit1)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119799558 (Lrit1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
fn3
LRR_1
Ig_2
LRRNT
IlvGEDA_leader
C2-set_3
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
119799558
NCBI-ProteinID:
XP_038165432
LinkDB
All DBs
Position
12:36627904..36635150
Genome browser
AA seq
622 aa
AA seq
DB search
MWVSLGMVWLLALGGPHQAWSICPSQCSCSLHTLSDGSKARTVVCSDPDLTLPPASVPPD
TCRLRLERTAIRRVPGEAFRSLSRLEQLWLPYNALSELSALMLRGLRRLRELRLPGNRLA
AFPWAALRDAPQLQLLDLQANRLLTLPPEAAHFLENLTFLDLSNNHLMRLPLELLDTWAH
LKTGPFLSGHRARLVLGLQDNPWVCDCRLYGLVHLLEGWALNLVFIEPRLRCASPRTLAG
VAFSQLELRKCQSPELRPGVTSIMSPLGSTVLLRCGATGIPGPEMSWRRANGRPLNGTVH
QEVSSDGSSWTLLDLPVVSLFDSGDYICQAKNFLGASETLISLIVTEPQTSTEYSGVPGV
PWPRTGEGAEAAAYNNKLVARHVPHIPEPVALATKPSAPVKEGLELQHLQMDVPGEFSRE
RAEPQGVQMVRSLKVVGDTYHSVSLVWKAPQAQNTMAFSVLYAVFGQRDMRRMTVEPGKT
SVTIEGLAPKTKYVACVCVQGLVPTKEQCVIFSTDEVVDAEGTQRLINMVVISVAAIIAL
PPTLLVCCGALRRRCQKCRTGGSAEASGAYVNLERLGHSEDGSEELSRSSLSEADRLLSA
RSSLDSQLLGVRGGRRINEYFC
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgtccctgggcatggtctggctccttgcacttgggggacctcaccaggcctgg
agcatctgtccctctcaatgcagctgcagcctgcacaccttgagtgacggcagcaaggcc
aggacagtggtgtgcagcgaccctgacttgacgctgcccccagcctcagttcctccggac
acctgcaggttgcgcctggagcgaaccgccatacgcagggtgcctggagaggccttcagg
tctctcagccgcctggagcagctatggctgccttacaacgctctcagcgagctcagcgcc
ctcatgctcagggggctgcgtcgcctacgagagcttcgtctgcctgggaaccgcctggct
gctttcccctgggcggcgctcagggatgctccacagttgcagctgctggacctgcaggcc
aatcgcttgttgaccttgccacctgaggctgcgcacttcctggagaaccttactttcctg
gacctctccaacaaccacttgatgaggctacctctggagctgctggacacctgggctcac
ctgaagaccggacccttcctttccggccaccgtgccaggctagtcctagggctccaggac
aacccctgggtatgtgactgtcgactctatggcctagttcatctcctagaaggctgggct
ttaaacttggtcttcatcgagcctagactgaggtgcgccagcccacgcaccctggctggg
gtggccttcagccagctggagctgagaaagtgtcagagcccagagctccgtccaggggtg
accagcatcatgtcccccttgggtagcacggtattgctacgctgtggagcaactgggatc
ccaggtcctgagatgagctggaggagagccaatggacgcccactcaatggcacagtgcac
caggaagtttccagtgatggctcaagctggactttgctggatctgcctgttgtatctctc
ttcgactcaggagactacatctgccaggccaagaactttctaggggcttctgaaactctt
atctccttgattgtcactgaaccccagacttctacagaatatagtggggttccgggggtc
ccgtggccaaggacaggagagggggcagaagctgctgcttacaacaacaagctggtggcc
aggcatgtcccccatataccggaacctgtagctctggctaccaagccctcggcacccgta
aaggaggggttggagctccagcacttacagatggatgtcccaggagagttctccagagag
cgagcagaaccccagggggtccagatggtcaggtctctcaaggtggtgggagatacttac
cacagtgtgtcgctggtgtggaaggcccctcaagctcagaacacgatggcctttagtgtc
ctttatgccgtctttgggcagcgtgacatgcggaggatgactgtggagcctgggaagact
agtgtcaccatcgaggggcttgctccaaagaccaagtatgtggcatgtgtctgtgtgcag
ggcctggtgcctacgaaggaacagtgtgtcatcttctctactgacgaggtggtagatgca
gagggcacccagcggctcatcaacatggtggtgatcagcgtggcagccattatcgccctg
cctcccaccctgctggtttgctgcggggctctccgaagacgctgccaaaagtgccgcact
gggggctccgcggaggcatccggtgcctatgttaacttggaaagactgggccacagcgag
gatggctcagaggagttgtcccggagcagcctcagtgaggcggacaggcttctctcagcg
cgctccagcctggactcccagctcttgggagtcaggggtggccgacgcatcaatgagtac
ttctgctga
DBGET
integrated database retrieval system
