Arvicola amphibius (Eurasian water vole): 119799935
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Entry
119799935 CDS
T08327
Symbol
Dis3
Name
(RefSeq) exosome complex exonuclease RRP44 isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119799935 (Dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119799935 (Dis3)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119799935 (Dis3)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
119799935
NCBI-ProteinID:
XP_038165763
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All DBs
Position
13:20787764..20813364
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AA seq
958 aa
AA seq
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MLKSKTFLKKTRAGGVVKIVREHYLRDDIGCGAPTCAACDGAHAAPALESQPGDQASSLC
PWPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPIYKRIRDVTNNREKHF
YTFTNEHHKETYIEQEQGENANDRNDRAIRVAAKWYNEHLKKISAENQLQVILITNDKKN
KEKAVEEGIPAFTCEEYVKSLTANPELIDRLACLSEDTNEIESGKIIFSEHLPLSKLQQG
IKSGSYLQGTFRASRENYLEATVWIHGDKEDEKEILIQGLRHLNRAIHEDVVAVELLPRS
QWVAPSSVVLHDEGPTEDDVERDEERELMLKTAVSEKMLRATGRVVGIIKRNWRPYCGML
SKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNL
GDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDP
PGCTDIDDALHCRKLSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMV
PELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRIDSA
AMNDDITTSLRGLNKLAKILKRGRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETN
SMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVKAAKSKNLEIKTDTAKS
LADSLDRAESPDFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIR
RYADIIVHRLLAVAIGADCTYPELTDKHKLSDICKNLNFRHKMAQYAQRASVAFHTQLFF
KNKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPKPRLTYDDEIPSLRIEGTV
FHVFDKVKVKITLDSSNLQHQKIRMALVEPQIPGINIPPDVSDMDLSGPGGKKRKLEK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtccaaaacgttcttaaagaagacccgcgcgggcggcgtggtaaagatcgtg
cgcgagcactacctgcgggatgacatcggctgcggggccccgacctgcgcggcctgcgac
ggggcgcatgccgctccggccctggagtcgcagcccggcgaccaggcgagcagcctctgc
ccgtggccgcactacctcctgccggacactaacgtgctgctgcaccagattgatgttctg
gaggacccagctatcaggaatgtcattgtgctccagacagtcctccaggaagtgagaaac
cggagtgcccccatctataagcggatcagggatgtgacgaataaccgggagaagcatttt
tacacattcactaacgagcaccataaagaaacctacattgaacaagaacagggagaaaat
gctaatgacagaaatgacagagccattcgagtagcagcaaaatggtacaatgaacatttg
aagaaaatatcagcagaaaaccagctgcaagttatccttataacaaatgacaagaaaaac
aaagaaaaggctgtagaagaaggaatcccagctttcacgtgtgaggagtatgtaaaaagc
ctgactgctaatcctgaacttatagatcgtcttgcttgcttgtctgaagacacgaatgaa
atagaaagtggaaaaataatattttcagagcatcttcccttaagtaagctccaacaaggc
ataaaatctggttcataccttcaaggaacatttagagctagcagggaaaattatttagaa
gccacagtgtggattcacggagacaaagaagatgaaaaagagatacttatacaaggacta
agacatctaaatagagctattcatgaagacgttgtggctgtggagcttctgcccaggagt
cagtgggtggcaccatcttctgtggttttacatgatgaaggtccaacggaagatgatgtg
gagagagatgaggagagagaactcatgcttaagactgctgtaagtgaaaaaatgttgagg
gctacaggtagagttgtaggaataataaaaaggaactggagaccatattgcggcatgctt
tccaagtctgatattaaggagtcaagaagacatctttttacacctgctgataagagaatt
ccacgaattcgaatagaaaccagacaggcttctgcactagaaggacggagaattattgtt
gctattgatggttggcctagaaattctagatatccaaatggacactttgttaaaaattta
ggtgatgttggagagaaagagacagaaacagaagttctgttgcttgaacatgatgttcct
catcagcccttttcccaggctgtccttagcttcctgcccaagatgccgtggagtattact
gagaaggacatgaaaaaccgagaagacctgagacatctgtgtgtttgcagtgtcgaccct
ccaggatgtactgacatagatgatgccctgcattgtagaaaactcagtaatggaaatttg
gaggttggtgttcacattgctgacgttagccatttcatcaggccaggaaatgcgttggat
caagaatcagccagaagaggaacaactgtttatctttgtgaaaagaggattgacatggtt
ccggagttgctcagctctaacttatgctccttaagatccaacgttgacaggttggcattt
tcctgtatttgggaaatgaatcataatgctgaaatcttaaaaacaagatttaccaaaagc
gtaattaattcaaaggcttctcttacatatgctgaagcacagatgagaattgattcagct
gctatgaatgatgatattaccactagtctccgtggactaaataaactagctaaaattctt
aaaagaggaaggattgaaaaaggggctttgactctgtcttctccagaagttcgattccac
atggacagtgaaactcatgatccaatagatctacagaccaaggaactgagagaaacaaat
tccatggtggaagaatttatgttacttgcaaatatttctgttgcaaaaaaaattcatgag
gaattttctgaacatgctctgcttcgaaaacatccagctccacctccctccaattatgaa
attcttgttaaggcagccaagtccaagaatttggaaattaagactgatacagccaagtct
ttggctgattctttggaccgggctgaatcccctgatttcccgtacctgaacactctttta
aggatattggccactcgctgtatgatgcaagctgtctacttctgttctgggatggataat
gactttcatcactatggcttagcctccccaatatacacacatttcacttctcccatcaga
agatatgcagatataattgttcatcggttgttggctgtggctattggggctgattgtact
tacccggagttgacagataaacacaagctttcagatatatgtaaaaatctcaatttccgg
cataaaatggctcagtatgctcagcgtgcatcagtagctttccatacccagctgtttttc
aaaaacaaaggaatagtaagcgaagaagcctatattctctttgtaagaaagaatgcaatt
gtggtgctaattccaaagtatggcttagaaggcacagttttttttgaagaaaaagataaa
ccaaagccacggcttacttatgatgatgagataccttcactcagaatagaaggtacagtg
ttccatgtctttgataaagttaaagtaaaaatcacattagattcatcaaatcttcaacat
cagaaaatccgcatggcccttgtggaaccacagataccaggaataaatattcctcctgat
gtttcagacatggatctcagtgggccaggagggaagaagaggaaacttgagaagtag
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