Arvicola amphibius (Eurasian water vole): 119799974
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Entry
119799974 CDS
T08327
Symbol
Hmbox1
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox-containing protein 1
KO
K24885
homeobox-containing protein 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119799974 (Hmbox1)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119799974 (Hmbox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
DUF494
AbiJ_NTD3
HTH_TSHZ3
HTH_26
HTH_24
CUT
HTH_31
NOC3p
HTH_23
Motif
Other DBs
NCBI-GeneID:
119799974
NCBI-ProteinID:
XP_041910038
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All DBs
Position
13:49264926..49390401
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AA seq
444 aa
AA seq
DB search
MLSSFPVVLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTKHEILHALETLDRLDQEHSDK
FGRRSSYGGSSYGNSTNNVPASSSTSHSFHARPSTGMSPSPSNSYDTSPQPCTTNQNGRE
NNDRLSTSNGKMSPSRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAF
LANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRP
APIPIEDPEWRQTPPPVSATPGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPGG
HSNSDDVDGNDYSEQDTWQARNGEEEEGRSSEGGREAEKDDSTSHSDHQDPISLAVEMAA
VNHTILALARQGANEIKTEALDDD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgctcagttccttcccagtggttttgctggaaaccatgtctcactatacagatgaaccc
agatttaccatagaacagatagatctgctccaacgtctccggcgcacggggatgacgaaa
catgaaattctccatgcattagaaactttggaccgtcttgatcaagagcatagtgataag
tttggaaggagatccagctacgggggaagctcctatgggaacagtaccaacaatgttcca
gcatcttcctctacaagccacagcttccacgcaagacccagcaccggaatgtccccatcg
cccagcaacagttatgatacctccccacagccttgcactaccaatcaaaatgggagggag
aacaacgaccgattgtccacatccaatgggaagatgtcgccatctcgctaccatgcaaac
agcatgggtcagaggtcatatagctttgaagcctcagaagaggatctagatgtagatgat
aaagtggaggagttaatgaggagggacagcagtgtgataaaagaggaaatcaaagccttt
cttgccaatcggaggatttcccaagcagttgttgcacaggtaacaggtatcagtcagagc
cggatctctcattggctgttgcagcaggggtcagacctgagtgaacagaagaaaagagca
ttttaccgatggtatcaacttgagaagacaaaccctggggctacgttaagtatgagacca
gcccctattccaatagaggatcctgaatggagacaaacacctcctccagtctctgccaca
cctggaaccttccgactccggcgggggagtagatttacctggagaaaggagtgcctagct
gttatggaaagttacttcaatgagaatcaatacccagatgaagcaaagagagaagagatt
gccaacgcttgcaatgcagtcatacagaagccaggcaaaaagctatccgacctggaacga
gttacctctctgaaagtttataattggtttgctaatagacggaaggagatcaagaggaga
gccaatatcgaagcagcaatcctggagagtcatgggatagacgtacagagtccgggaggc
cactccaacagcgatgacgtggacgggaacgactactccgagcaggacacttggcaagca
cgcaatggggaggaggaggagggaagaagttcagagggaggcagagaagcagagaaggat
gacagcacgagccatagtgaccaccaagaccccatctcactagctgtggagatggcagcc
gtcaaccacactatcttggcattggcccggcagggagccaatgagatcaagacagaggcc
ctggatgatgactga
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