Arvicola amphibius (Eurasian water vole): 119800049
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Entry
119800049 CDS
T08327
Symbol
Wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119800049 (Wdhd1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
119800049 (Wdhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
WD40_Prp19
Beta-prop_THOC3
Ctf4_C
Beta-prop_WDR5
HMG_WDHD1
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WDR55
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_Gbeta
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
HMG_box
Beta-prop_WDR75_2nd
Beta-prop_Vps41
eIF2A
NBCH_WD40
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Tricorn_2nd
Beta-prop_Nup120_160
Beta-prop_WDR75_1st
NrS1-1_pol-like_HBD
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
119800049
NCBI-ProteinID:
XP_038165996
LinkDB
All DBs
Position
13:65138409..65180106
Genome browser
AA seq
1121 aa
AA seq
DB search
MPATQKPMRYGHTEGHTDVCFDDSGSFIVTCGSDGDVRMWEDLDDDDPKSINVGEKAFSC
ALKNGKLVTAVSNNTVQVYTFPEGVPDGILTRFTTNANHVVFNRNGTKIAAGSSDFLIKV
VDVMDNSQQQAFRGHDAPVLSLSFDPKDIFLASSSCDGTVRVWNVSDQTCAVSWPVLQKC
NDVVNAKSICRLAWQPGAGKLLAVPVEKSVKLYKRETWSNPFDLSDSSISQTLNIVTWSP
CGQYLAAGTINGLIVVWNVETKDCMERVKHEKGYAVCGLAWHPTCGRICYTDVEGNLGIL
ENVCNLNGKVSSSKVSSKVEKDFSDLFDGDDTSGAGDFLNDNAVEVPSFSKGIINDEDED
DDLMLAAERLRRRSHILGDDENSADATMLNTGRHKEEGEDDQAGSIHDLPLTKSQRPLYD
GPMPTPRQKPFQPSSTPLHLSHRFMVWNSVGIIRCYNDDQDSAIDVEFHDTSIHHATHLS
NAFNYTMGTLSHEAVLLACESTDELASKLHCLHFSSWDSSKEWIVDMPQSEDIEAICLGQ
GWAAAATTALLLRLFTIGGVQKEIFCLPGPVVSMAGHGEQLCIVYHRGMGFDGDQCLGVQ
LLELGQKKEQVLHGDPLPLTRKSYLAWLGFSAEGTPCYVDSEGCVRMLNRGLGNTWTPVC
NIREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFQLPYCQTATEK
GQMEEQFWHSVLFHNYLDYLAKNGYEYEESTKNQAVKEQQELLMKMLALSCKLEREFRCV
ELASLMTQNAVNLAIKYASRSRKLILAQKLSELAAEKAAELAETQIEEEKEEDFRKKLNA
GYSRTSTEWSQPRARNQVEEDTEEREETVPEERPEPHNHGQNLFQSANSPDMPALKSGAV
FPSSQGRVNPFKVLVSSKEPAVSMNSTRSTNILDNMNKSSRKPTPLSRAANNEKSPVIKP
LVPKPKSKQASAASYFQKRASQGDKTEEVKENPKNSSSETPVVCPQNSENQRPKTGFQMW
LEENRSHILCDNPDFSDEADIIKEGMVRFRALSAEERKAWTNKAKGELASDGAEAKKRKR
EICEAENQEEAAKENLDLSKKQKALDLSANQKLSAFAFKQE
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgccggccacacagaagcccatgaggtacgggcacacggaaggacataccgacgtctgt
tttgatgattctggaagttttattgtgacttgtggaagtgacggtgatgtgaggatgtgg
gaagatttggacgatgatgaccccaagtctattaatgttggagaaaaggcattttcatgt
gccttgaagaatggaaagttggtcactgcagtttctaacaatactgtccaagtctacaca
ttccctgaaggagttccggatggcatattaacacggttcacgacaaatgcaaaccacgtg
gtcttcaatagaaacggcaccaaaattgctgctgggtccagtgattttctgatcaaagtt
gtggacgtgatggataacagccagcagcaagcatttagaggacacgatgcccctgtttta
agtttgtcttttgatcctaaggatatctttctggcatcatctagttgtgatggaactgtc
agagtgtggaatgtttctgatcagacatgtgctgttagttggccagtcctacaaaagtgc
aacgatgttgtgaatgccaagtctatctgcagactcgcgtggcagcccggagccgggaag
ttattagcagttcctgtggaaaaatctgttaagctgtacaaaagagaaacttggagtaat
ccatttgatctttcagatagttctatctctcagacactcaatatagttacctggtctccc
tgtgggcagtatttggctgcaggtactattaatggcttaattgtagtttggaatgtggaa
accaaagactgcatggaaagggtgaaacatgagaaaggttatgcagtttgtggcctggcc
tggcatcctacttgtggtcgaatctgttacactgatgtggaagggaatcttgggatcctg
gagaatgtttgcaacctcaatggcaaggtgtcgagcagtaaggtgtctagtaaagtggaa
aaggatttcagtgatctttttgatggagacgatacaagtggcgctggcgatttcctaaat
gacaatgcggttgaggtgccgtctttttccaaaggaattataaatgacgaggatgaggat
gatgacctcatgctggctgcagagcgtctccgacggagaagtcatatcttgggagatgat
gagaactcagctgatgctacaatgctaaacactggtcgtcacaaagaggaaggggaagat
gaccaggcaggcagtattcatgatctcccccttactaaatcccaaaggccgctctacgat
gggcccatgccgacgcctcgacagaagccgttccagcccagttctacgcccttgcatctc
tctcacaggttcatggtgtggaactctgttgggattattcgttgctataacgatgatcag
gacagtgccatagatgtggaattccacgacacctccatccatcatgcaacgcacctatcg
aacgctttcaactacaccatgggaactctttcccatgaagctgttctgttggcatgtgaa
agcactgatgaattagcaagcaagcttcattgcctgcacttcagctcttgggattcaagc
aaggagtggatagtagatatgcctcagagtgaagatattgaagccatatgtcttggtcaa
gggtgggctgctgctgctactactgccttgctccttcgattgtttactattggaggcgtt
cagaaagaaatcttctgccttcccggacccgtggtgtcaatggcaggacacggagaacag
ctttgcattgtttaccatagaggtatggggtttgatggagatcagtgcctcggagttcaa
ctgctagagttggggcaaaagaaagaacaggttctgcatggcgaccctcttcctcttaca
aggaagtcctaccttgcgtggctggggttttctgctgaaggtaccccctgttatgtggat
tccgaaggctgtgttcgaatgcttaacagagggcttgggaacacgtggactcctgtctgt
aacatacgagagcactgcaaagggaaatctgatcactactgggtggttgggatccatgag
aatccccagcagctgaggtgcatcccttgtaaaggttctcggttccctcccacccttcca
cgtcccgctgtggccatattatcctttcaacttccttattgtcagactgccacagagaaa
ggccaaatggaggaacagttttggcattcagtcctgtttcacaactaccttgattacttg
gctaaaaatggttatgagtatgaagagagcactaaaaatcaggcggtaaaagagcagcaa
gaacttctgatgaaaatgcttgcgctttcttgtaaactggaacgagaatttcgctgtgtg
gaactggccagtctaatgactcaaaatgctgtgaacttagccattaagtatgcttctcgc
tctcggaaattaatattggctcaaaaacttagtgagctcgctgcagagaaagcagctgag
ttggcagaaacccagatagaagaagagaaagaagaggatttcagaaagaaactgaatgct
ggttacagtcgtacctctacagaatggagtcagccacgggccagaaatcaagttgaagaa
gacactgaagaaagagaagagactgtcccagaagaaaggccagagccacacaaccacgga
cagaacttattccaaagtgcaaattcacctgatatgccagctcttaaatcaggtgcagtt
ttccctagcagccaaggacgggtaaaccccttcaaggtgctagtcagttccaaagaacca
gctgtatcgatgaactcaacacgttcaactaatattttagacaatatgaacaaatcatcc
aggaagcccacccctctcagtcgagcagcaaataatgaaaaatctccagttataaagcct
cttgtgcccaagccaaagtctaagcaggcatctgcagcatcctatttccagaaaagagct
tcacagggcgataagactgaggaagtaaaagaaaatcctaaaaattcgtcatctgaaact
ccagttgtgtgccctcaaaactctgaaaaccaaaggccaaagactgggttccagatgtgg
ctagaagaaaacagaagtcatattttgtgtgacaaccctgacttttcagatgaagcagac
ataataaaagagggaatggttcgattcagagcactgtctgccgaagagaggaaggcatgg
accaacaaggccaagggagagcttgccagtgatggagctgaagcgaagaagcgaaaacgt
gagatctgcgaggcagaaaaccaggaggaagcagccaaggagaatctggatctgtctaaa
aagcaaaaagcgttagatctttctgccaaccagaagctgtcagcttttgcgttcaagcag
gaataa
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