Arvicola amphibius (Eurasian water vole): 119800272
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Entry
119800272 CDS
T08327
Symbol
Cdhr5
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119800272 (Cdhr5)
Cell adhesion molecules [BR:
aamp04515
]
Cadherins
Cadherin related
119800272 (Cdhr5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
MauE
Motif
Other DBs
NCBI-GeneID:
119800272
NCBI-ProteinID:
XP_038166343
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Position
1:complement(143218300..143226171)
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AA seq
836 aa
AA seq
DB search
MGAPALLWPPLLLPLLLVLFCQPPGTSAQAQGCSVGQSIVQIEENSNISEPLLNISVSDG
LHVTLGSRSTPSAFNIVKNQLFLNVTPDYEKNSMLEAVLECRRGNDLLTELFVSVVILDV
NDNPPKFPFTIKEYNVSEDTRVGTTVIPGTELAAEDADLDDMLYYTLQEVTPNASSFFSL
AGLTNPALTLSRTLDFYKNQNMTFRLLAQDTWNANKTEPSHTATATLIINVLPADLRTPW
FLPCSFSDGYFCIHAQYQGVVPTGLLLPSPLILSPGPIYAVDGDQEINQPIIYSIMAGNT
DNTFIIDEKSGNLTMSKIIPSPTTFTLLVRADQDDRARYSMTQAVVEARDAAGNSLQFSQ
SPYHGMVVLGSEAGTAVKDRTSPSETLRIQAQYSDFPDLNSDIKYEITNSSDFQMNEDVM
LTTAAMKETGIFYVQVEATSSVTNDKATTVVEIQVSEQEAPSTESPKPPEAGGTTSSSTT
LEAPTTSGTSQGPATTSFGGSAGPVPPSGTTLSPPASTSSTPGGLPTLGTSTSPKTATPG
GGSTQTPKPGTSQPVIPITGASTTSKPVTPSGGSTQTPMPGTSQPTAPTSRTSTSLIPST
SRGDPTQTPKPGASHPTATTPIRSPSPSGEGAMGDQKFSTVDMAVLGGVLGALLLLALIG
LVILIHKHYRHRFNCCCGSKAKVPPPENNYDNLAFFPDHKTSWSSTSNPQPQPDPEPSQP
PSGSHSPMSSSPTPPSSAPPSPELRAPGSPKTVQAGDSPSAVKSILTKERRPEGEGGYKA
VWFGKDIREDADVVVLNEPTADMDSASATESEGSDDDDPDQKKGLHLGAEIDHTYI
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgggggctccggccctcctgtggcctccgctgctgctgccattgctcttagtgctgttt
tgccaacctccaggaacctcggcccaggcccaaggctgctctgtgggccagtcgattgtt
caaattgaggagaacagtaatatttctgagccgctgttgaacatttcggtctcagatggc
ctgcatgtgaccctggggtccaggtccactccttctgcatttaatattgtgaaaaaccag
ctgtttctcaacgtgactccagattatgagaaaaattctatgctggaggcagtcctggag
tgcaggagaggaaatgacttgctgaccgagttgtttgtgtctgtggttatcctggatgtc
aatgacaatcccccaaagtttccctttacaatcaaggaatacaatgtatcagaggacacc
agagtgggtacaactgtcatccctgggacagaactggcggccgaagacgctgacttagat
gacatgctatattacactctgcaggaagtgacccctaatgccagcagcttcttctccctg
gcggggttaaccaaccctgctctgacactgagccggaccctggatttctataagaatcag
aacatgaccttcaggctgttggcacaggatacttggaatgcaaacaaaacagaacccagc
cacacggccactgccaccctgatcataaacgtgcttccggctgacctacggaccccctgg
ttcctgccttgctccttctcagatggctacttctgcatccatgcccagtaccaaggagtg
gtccccacgggactcctactgccatcccccctcatcttgagtcctggtcctatctatgct
gtggacggagatcaggagattaaccagcctatcatctacagcattatggcgggaaacacg
gataacacattcatcatcgacgaaaagtctggcaacctcacgatgagcaaaattatcccc
agccccacgaccttcaccctgctggtcagagccgatcaggatgatagggcccgctactca
atgacccaggctgttgtggaggctcgtgatgcagctgggaactcactccagttctcccag
agcccgtaccatggtatggtggtacttggttctgaggctggcacagcagtgaaggacagg
acctccccttcggagaccctaaggatccaggctcagtactcagacttcccggacctcaac
tcggacatcaagtatgaaatcaccaactcctcagattttcagatgaacgaggatgtcatg
ctgaccactgcggctatgaaagaaacaggcatcttctatgtacaggtagaagctaccagt
tctgtgactaatgataaagccaccactgtcgttgagatccaagtgtcagagcaagaggcc
ccctccacagagtcccccaagcccccagaagctggaggaacaacttcaagtagcaccact
ttggaagcccccacgacctctgggacctctcaaggacctgccacaaccagcttcggggga
agtgctggcccagtcccaccctcaggcacaactctaagcccacctgcctctacctcatcc
acacctggggggctccctactcttggaaccagcacttcccccaagacagccactcctggt
ggggggtccacacagacccccaagccaggaacctctcagccagtgatccccattacaggt
gcaagcaccacttcaaagccagtcacacccagtgggggctccacacagacccccatgcca
gggacctctcagccgacagcccctacttcaagaacaagtacctccctcattccaagtaca
tccagaggggacccaacgcagacccccaagccaggagcctctcatccgacagccaccacg
cccatcaggagcccatcaccatcaggagaaggtgcgatgggtgaccagaaattttccacg
gtggacatggcagtgctgggcggggtgctaggtgcgctcttgttgctggccctcatcggc
ctggtcatcctcatccataaacactaccgtcaccggttcaactgctgctgtggcagcaag
gctaaggtgcctcctccggagaataactatgacaacctggccttcttcccggaccacaag
accagctggtcgtccacctccaacccgcagccacagccagaccctgagccctcccagcct
ccctctgggtcccatagccccatgtcttccagccccacgccccccagctctgcgcctcct
agcccagagctcagagctcccgggtctcctaaaaccgtccaggctggggacagtccttca
gccgtgaagtctattctgactaaggagcggcggccggagggggagggtggctacaaggct
gtgtggttcggcaaggacatcagagaggatgctgacgtggtggtcctcaacgagcccaca
gcagacatggacagcgccagcgccacggaaagtgagggcagcgatgatgatgaccctgac
cagaaaaagggtcttcaccttggcgctgaaatcgaccacacttatatctag
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