Arvicola amphibius (Eurasian water vole): 119800589
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Entry
119800589 CDS
T08327
Symbol
Rorc
Name
(RefSeq) nuclear receptor ROR-gamma isoform X3
KO
K08534
RAR-related orphan receptor gamma
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04659
Th17 cell differentiation
aamp04710
Circadian rhythm
aamp05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
119800589 (Rorc)
09159 Environmental adaptation
04710 Circadian rhythm
119800589 (Rorc)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
119800589 (Rorc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119800589 (Rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aamp03310
]
119800589 (Rorc)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119800589 (Rorc)
Nuclear receptors [BR:
aamp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
119800589 (Rorc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119800589
NCBI-ProteinID:
XP_038166666
LinkDB
All DBs
Position
14
Genome browser
AA seq
551 aa
AA seq
DB search
MDRAPQRHHRTSRELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQQQQQQQQQEQVAKTPPAEGHGADTLTYTLGLPDGQLPLGASPDLPEASACPPGLLR
ASGSGPPYSNNLAKTEVQGASSHLEYSPEQGKAEGRNSVYSTDSQLTSGRCGLHFEGARH
PELGEPEQGPDSHCSPSFCSAPEALYASLTDIEYLVQNVCKSYRETCQLRLEDLLRQRTN
LFSREEVTSYQRKVRAEDTREGRASPPPPLEEPRDGYLHRSPPLSLQSMWEMWERCAHHL
TEAIQYVVEFAKRLSGFMELCQNDQIILLKAGAMEVVLVRMCRAYNADNHTVFFEGKYGG
VELFRALGCSELISSIFDFSHFLSALHFSEDEIALYTALVLINANRPGLQEKRRVEHLQY
SLELAFHHHLCKTHRQGLLAKLPPRGKLRSLCSQHVEKLQLFQSLHPIVVQAAFPPLYKE
LFSADVEPPRG
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacaccaccgaacatctcgggaacttctggctgcaaagaag
actcatacttcacaaattgaagtaataccttgcaagatctgtggggataagtcatctggg
atccactacggggtcatcacctgtgaggggtgcaagggcttctttcgccgcagccagcag
tgtaatgtggcctactcctgcacccgtcagcagaactgccccattgaccgcaccagccgc
aaccgatgccaacactgccgcctgcagaagtgcctggctctgggcatgtcccgagatgct
gttaagttcggccgaatgtccaagaagcagagggacagtctccatgcagaagtgcagaaa
caactgcagcaacagcagcagcaacagcagcaacaggaacaagtggccaagactcctcca
gcagagggccatggagcagatacccttacatacactttggggctcccagatgggcagcta
ccactgggcgcctcacctgacctgcctgaggcctctgcttgtccccctggcctcctgaga
gcctcaggctctgggcccccatattccaacaacttggccaaaacagaggtccaaggagcc
tccagccaccttgagtatagcccagagcaaggcaaagctgaaggcagaaacagcgtctac
agcacagacagccagcttacttctggaagatgtggacttcatttcgagggagccaggcat
cccgagcttggggaaccagaacaaggtccagacagccactgcagtcccagtttctgcagt
gccccagaggcactgtatgcctctctgacagacatagagtacctggtccagaatgtctgc
aagtcctaccgagagacatgccagctgcggctggaggacctgctacggcaacgcaccaac
ctcttctccagggaggaggtgaccagctaccagaggaaggtgagggcagaagacacgagg
gaagggagggcatcacccccaccaccactggaagagcccagagatggctacttgcacagg
tcacctcctctgtccctgcagtccatgtgggagatgtgggagcgttgtgcccaccacctc
actgaggccattcagtatgtggtggagtttgccaagcggctctcgggcttcatggagctc
tgccagaatgaccagatcatactactgaaagcaggagcaatggaagtggtgctcgtgagg
atgtgccgggcctacaatgctgacaaccacacagtcttctttgaaggcaaatatggtggc
gtggagctgttccgagccttgggctgcagcgagctcatcagttccatattcgacttttcc
cacttcctcagtgccttgcatttctctgaggatgagatcgccctctacacggccctggtt
ctcatcaatgccaaccggcctgggctccaagagaaaaggagagtggagcatctgcaatac
agtctggagctggccttccatcatcatctctgcaagacccatcgccaaggcctcctagcc
aagctgccgcccagagggaaactccggagcctgtgcagccagcacgtggaaaagctgcag
ctcttccagagcctccaccccatcgtggtccaagctgccttccctcctctctacaaggag
ctcttcagcgcagacgtggagcccccgaggggctaa
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