Arvicola amphibius (Eurasian water vole): 119800773
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Entry
119800773 CDS
T08327
Symbol
Pdlim5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119800773 (Pdlim5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119800773 (Pdlim5)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
119800773 (Pdlim5)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119800773
NCBI-ProteinID:
XP_038166946
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Position
14:complement(48057435..48225580)
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AA seq
596 aa
AA seq
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MSNYNVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAHG
MTHLEAQNKIKGCTGSLNMTLQRASAAAKPEPVAVQKGEPKEVVKPVPITSPAVSKVTST
TNTAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPPPVAAVTPPPFSASGLH
VNANLNADQCSSTLNTGKSAVNVPRQPTVTSVCSEPAQELAEGQRRGSQGDIKQQNGPPR
KHIVERNTEFYHIPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEN
DNTKKANSTQEPSQQSAAPGASPLSKSESLETPGSSRPGVAGLKTTAAFKPVGSTGAVKS
PSWQRPNQAAPSTARITNSGTSSGTGVPANSAAGPPQPGDQDTLVQRAEHIPAGKRTPMC
AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECG
RCQGKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICRG
CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacaatgtgtcattggtcggcccagccccttggggcttccgtctccaaggt
ggcaaggatttcaacatgcccctgacaatctctagtctgaaagatggtggcaaggcatcg
caggcgcatgtgagaataggcgatgtggtcctcagcattgatgggatcagtgcacatgga
atgacccatcttgaagcccagaacaagattaagggttgtacaggctcgttgaatatgact
ctgcaaagagcatctgctgcagccaagcctgagcctgttgctgttcagaagggtgaacct
aaagaagtagttaagcctgtgcccattacatctcctgctgtatccaaagtcacttccaca
accaacacggcctacaataaagctcctcggccctttggttctgtgtcttcaccaaaagtc
acatccatcccatcaccatcgtcagccttcaccccagcccatgccaccacttcatcacat
gcttcccctccacctgtggctgctgtcactcctcccccattctctgcatccggactgcat
gttaatgccaatcttaatgctgaccagtgttcatctaccctgaacactggtaaatctgca
gttaatgtcccacggcagcccacagtcaccagcgtgtgttccgagcctgctcaggagcta
gcagagggacagagaagaggatcccagggtgacattaaacagcaaaatggcccaccaaga
aaacacattgtggagcgcaacacggagttttatcacatccccactcacagtgatgccagc
aagaagaggctgattgaggacacggaggactggcgcccacggactggaacaactcagtct
cgttccttccggatccttgcccagatcactgggactgaacatctgaaagaatctgaaaac
gacaatacaaagaaggcaaatagcactcaggagccttctcagcagtcggcagcacccgga
gcttcacctctgagcaagtctgagagcctagagaccccaggttcaagcaggccaggcgtg
gctggcctcaagacgactgctgccttcaagcctgtaggatccaccggcgctgtcaagtca
ccaagctggcagcgtccaaaccaagcagcgccttctactgcaagaattacaaacagcggg
acttcttcaggtacaggggtacctgcgaactcagctgcggggccgccccagccaggtgac
caggacacactggtgcagagagccgagcacattccagcggggaagcgaactcccatgtgt
gcccactgcaatcaagtcatcaggggtcctttccttgtggctctggggaagtcttggcac
ccagaagaatttaactgtgctcactgcaaaaacacgatggcctacattgggtttgttgag
gagaagggagcactgtactgcgagctatgttatgagaagttctttgctcctgaatgtggc
cggtgccaggggaagatcctaggggaagtcatcaatgctttgaaacaaacctggcacgtg
tcctgttttgtgtgtgtggcctgtggaaaacccattcgaaacaatgttttccacttggaa
gatggagagccatactgtgagactgattattatgctctttttggaacaatatgccgtgga
tgcgaattccccatagaagctggcgacatgttccttgaagctctgggctacacctggcat
gatacttgctttgtgtgctcggtgtgttgtgaaagtttggaaggtcagacatttttctcc
aagaaggacaagcctctttgcaaaaaacatgctcattctgtgaatttttga
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