Arvicola amphibius (Eurasian water vole): 119800849
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Entry
119800849 CDS
T08327
Symbol
Sema6c
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119800849 (Sema6c)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
119800849
NCBI-ProteinID:
XP_038167089
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Position
14:6260889..6274482
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AA seq
959 aa
AA seq
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MHAPGQTWDLHGHCSILQGTHAGAQAMGHGHAWTQRTRRGGRGRLGSRNFVWLGPEQANM
GKQGTEALRQAGCLGSALTPPYLPFRDHVFSFDLQAQEEGEGLVPNKFLTWRSQDVENCA
VRGKLTDECYNYIRVLVPWDSQRLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFD
ATQSNVAIFAEGSLYSATAADFQASDAVVYRSLGSQPPLRSAKYDSKWLREPHFVYALEH
RDHVYFFFREVAVEDSRLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGD
STFYFDVLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDVERAFEGKFKEQRS
LDGAWTPVSEDRVPSPRPGSCAGVGGAASFSSSQDLPDAVLLFIKAHPLLDPAVPPATHQ
PLLTLTSRALLTQVAVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLRPEPVILEEID
AYSPARCSGKRSAQASRRIIGLELDTEGHRLFVAFPGCIVYLPLSRCARHGACQRSCLAS
QDPYCGWHRLKGCVSIRGPGGTDVDMTGNQESMEHGDCQDGATGSQSGPGDSAYVHLGPG
PSLETPSPPSDAHPGPQSSTLGAHTQGVRRDLPPASASRSIPIPLLLACVAAAFALGASV
SGFLVSCACRRARRRRSKDIESPGLPRPLSLRSLARLHGGGPEPPPPPKDGDAAQTAQLY
TTFLPPPDGGPPPDLACLPTPESTPELPVKHLRASGGPWEWNQNGNNASEGPGRPAGCSA
AGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEQLAPAAFSSRPPAPA
PSPLPRDCVPPLRLDVPPEGKRAAPGGRPALSAPAPRLGVGRRLPFPTHRAPPALLTRVP
SGGPARYSGGPGRHLLYLGRPDGYRGRSLKRADVKSPLTPKPPLAASTPPAPHGGHFNF
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgcatgctcctgggcagacatgggacctgcatggccactgcagcatcttgcaggggaca
catgcaggtgcacaagccatgggacatggacatgcttggacccagagaacaaggcgtgga
ggaagggggaggctagggagcaggaactttgtgtggcttggccctgagcaggcgaacatg
ggtaagcaggggactgaggcgctcaggcaggcagggtgcctcggctcagctctgacccct
ccttacctacccttcagggatcacgttttctccttcgatcttcaagcccaagaagaaggg
gaggggctggtgcccaataagtttctgacatggaggagccaggacgtggagaactgtgct
gttcggggaaagctcacggacgaatgctacaactacatccgtgttcttgttccctgggac
tcgcagaggctccttgcctgtggaacaaactcgttcagccccgtgtgccgcagctatggg
ataacttcgctgcaacaggaaggcgaggagctgagtggacaagctcgatgcccctttgat
gccacccagtcaaatgtggccatctttgcagagggcagtttgtactcggccacagcagcg
gatttccaggctagtgatgctgtagtttacagaagccttggatcacagcccccactccgt
tctgccaagtatgactccaagtggttgcgagagccacactttgtctatgctttggagcac
agagaccacgtctacttcttcttccgagaggttgctgtagaggattcccggctggggagg
gtgcagttttctcgggtagccagggtgtgtaaacgtgacatgggcggctcacctagggcc
ttggaccgccactggacttccttccttaagctgaggctcaactgctctgtccccggggac
tctaccttctactttgacgtcttacaggccttaacggggcctgtgaacctgcatggccgc
tctgctctctttggggtcttcactactcagactaacagcattcctgggtctgcagtctgc
gccttctacctggacgacgttgagcgtgcctttgagggcaagtttaaggagcagaggagt
ctggatggggcctggactcctgtttctgaggacagagtcccctcacccaggccagggtcc
tgtgcaggtgtgggtggagctgcctcgttctcctcctctcaagacctacctgatgctgtc
ctgctcttcatcaaggctcacccacttctggatcccgctgtgccgcctgccactcaccag
cctctcctcactctcaccagcagggctctgctgacccaggtagctgtggatggcatggct
gggccgcacagaaataccacagtcttgtttcttgggtccaatgatgggacagtgctgaag
gtgttacctccagggggacagtctctgcgacctgagcctgtcatactggaagagattgat
gcctacagccctgcccggtgcagtgggaagcgctcggcccaagcttcacggcggatcata
gggctggagctggacaccgagggtcacaggctctttgtggcctttcctggatgcatcgtc
tacctccctctcagccgctgtgccaggcatggggcatgtcagaggagctgtctggcttct
caggacccatactgtgggtggcatcgactgaaaggctgtgtgagcatcaggggacctggt
gggactgatgtggatatgactgggaaccaggaatccatggagcacggtgactgccaagat
ggagctactgggagtcagtctggccctggggattctgcttatgtgcatctgggtcctggc
ccttcccttgagacccccagtccccccagtgatgcccacccagggccccagtcttccact
cttggagctcacacgcagggcgtgcgcagggaccttcccccagcttcagcctcccgctcc
atccccataccactcctcctggcctgcgtggcggcggccttcgccctgggcgcctcagtc
tccggcttcttggtgtcctgtgcttgtcgccgagcgcgtcgccgtcggagcaaggacatc
gagagcccggggctgccgcgccctctctccctccgcagtctggcccggctgcacggtggc
ggtcctgagcccccgcctccgcccaaggatggagatgctgcgcaaacggcccagctctac
accaccttcctgcctccgcccgatggcggacccccaccggacctcgcctgcctgcccacc
cccgagtccacgcccgaactgccggtgaagcacctccgtgcctccggggggccctgggag
tggaaccagaacgggaacaacgcgtcggagggccccggccgcccggcgggctgcagtgcg
gcgggcgggcccgcgccgcgggtgctggtgcggccgcccccgccgggctgcccggggcag
gcggtggaggtgaccacgctggaggaactgctgcgctacctgcacggcccgcagccgccc
aggaagggcgccgaacagctcgctccggccgcgttcagctcgcggccgcccgccccggcc
cccagcccgctgccgcgggactgcgtgccgccgctcaggctcgacgtgccccccgagggc
aagcgcgcggctcccggcgggcggcccgccctctcggcccccgcgccgcgcctgggcgtc
ggccgcaggttgcccttccccacgcaccgcgcgcccccggcgctgctcacgcgcgtgccc
tcggggggcccggctaggtactccggggggcccgggaggcacctcctgtacctgggccgg
cccgacggctaccgcggccgctccctgaagagggcggacgtgaagtccccgctgaccccc
aagccgcccctcgccgcctcgacgccgcccgcgccgcacggcggccattttaacttctga
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