Arvicola amphibius (Eurasian water vole): 119800890
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Entry
119800890 CDS
T08327
Symbol
Ttf2
Name
(RefSeq) LOW QUALITY PROTEIN: transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
119800890 (Ttf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119800890 (Ttf2)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119800890 (Ttf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Motif
Other DBs
NCBI-GeneID:
119800890
NCBI-ProteinID:
XP_038167167
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All DBs
Position
14:complement(12271151..12304055)
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AA seq
1167 aa
AA seq
DB search
MEVVKCPDHGTVCFLKTGVRDGPNKGKSFYVCRKNTCGFVLATDIPVSHCLLHEDFMVEL
QGLFLSQGKKEWRLFFRCTGSKAKGKHWCGDVPWQDPNPRDHHGASKPPQASELFSHSPS
QPRNPFKVLNSNEKAALRKQLVTGKGEGKAADKKLRENEDQLWDQKKEQKPKSNCSVEKD
PSGDLVTERQSGVRKDSSSDLVTERQSGVRKEQEEKAKFQPQTKKTEGMASKQGHGDVLQ
RTCVVPQKSKSESRDVPNMPEPLRGKETQSLLQKVPGQNPXSKAQKEGHFSREQLRNGEA
QSRTGTDAPSAQASREGAPRLCLREVYHAVSSSDDSEEEDGVSSRPESPLLFDLPVDSQN
GGNLHLSDQCVQRQIPAASGVSKKGESSDPAAQRANLITQLRQKKGTLAAVNIQALPDKG
EKLLKQIQALEDDLNALALSPEQGAKENCSSQEPQQSDRTKTDADPPRFVPPQPLPTQDG
QLAGSLGLKAGRQVTAEGSSQRSIGHMNQHRLHNTWKITWITSRAINELHQSLESCPDET
AVAEDPAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTKKNQK
SKEKDKSVDFIALLSQDSSVFTSNGTLIVCPASLIHHWKNEVEKHVHSNRLRICLYHGPN
RSRQAKEXALYYDIVITTYSLLAKEIPTAKEEGDVPGFKLSVEGISAPLLQVVWARIILD
EAHNVKNPRVQASIAVCKLQAQARWAVTGTPIQNNLLDMYSLMKFLRCXPFDEFSSLKSQ
VDNGSXEGGERLSILTRSLXAEETKTNLDSTAKPLIPLVYRASSSHSRCRLPQRRFQLHR
LTLSEDEQDVYDVFLAWSRSALQSYLKRHEGRGSHPGRSPDNPFSRGKPEFGSGVPQCST
PADSQRPSTVTSVSQLLRLRQCACHLSLLKSALDPTEXESEDLSLSLEEQLSALTLSQVE
VSESSPTVCLNGRVRQRGAFTDTRRSTKVSYLLAELDAIGKGPGFQKSVIVSQWTSMLQV
VALHLRARTDFAAIDGSVNPKHRMDLVEAFNHSQEPQVMLISLLAGGVGLNLTGGNHLFL
LDMHWNPSLEDQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQLQEKKKHLAKQVLSGSG
ASVTKLTLADLKILFGILASSAGAGVR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggtgaagtgtccggaccacgggactgtctgcttcttaaagaccggcgtccgc
gatggcccgaataagggaaagagcttctacgtgtgccggaagaacacatgcggcttcgtg
ctagccaccgatattcctgtttctcattgtttattgcatgaggacttcatggtagagctt
cagggcttgtttctgtcacagggcaagaaagaatggaggttgttcttccggtgtactgga
agcaaggcgaaggggaagcattggtgtggggatgtcccatggcaggatcctaatcctaga
gaccatcatggagccagcaagcctccgcaggcatctgagttattttctcattctcccagc
cagccaagaaacccattcaaggtgcttaacagtaatgaaaaagcagctctcaggaagcag
ttggtcacaggaaaaggtgagggaaaggcagctgataagaagctgagagaaaacgaagac
cagctctgggatcaaaagaaagaacagaaacccaagtctaactgcagcgtggagaaagac
ccctccggtgacctggtgacagaaagacagtctggtgtcaggaaagactcctcctctgac
ctggtgacagaaagacagtctggtgtcaggaaagaacaagaggagaaagcaaagtttcag
ccccaaactaagaagactgaaggaatggcttccaaacaaggccatggagatgtgctccaa
cgaacatgcgtggttcctcagaagtcaaagagcgaaagtcgagatgtcccaaacatgcca
gaacctctgagaggaaaggaaacccagtctttacttcagaaggttcctggtcagaaccca
naaagcaaggcccagaaagaaggacacttcagcagggagcagctcaggaatggggaggcc
caaagcagaacagggacagatgcccccagtgcacaggcctcccgggaaggagctcctagg
ctttgcttgcgggaggtctaccatgctgtctccagcagcgatgatagtgaggaagaagat
ggtgtatccagtaggccagagtccccacttctctttgacttgcctgtggactcccagaat
ggggggaaccttcacctttctgatcagtgtgtgcaaagacagatacctgctgcctcaggt
gtctccaagaagggagagtcttctgacccagcagcccagcgtgcaaaccttataacacag
ttgagacaaaagaagggcacactggctgcagtgaatatccaggctctccctgacaagggt
gagaagttgctgaagcaaatccaggcgttggaggacgacctcaatgccctggctctctct
ccagagcaaggagctaaggagaactgtagctctcaggaaccacagcagagtgaccgcacc
aaaaccgatgctgaccctccgcgcttcgtgcctccccagccccttcccactcaggatggc
cagcttgcaggctctctaggactaaaggcaggccgccaggtcactgctgaaggatcaagc
cagcgctcaataggccatatgaaccagcatcgccttcataatacatggaagatcacatgg
atcacaagtagagccattaacgaactgcatcagtcactggagtcttgtcctgacgagaca
gcagtggcagaagacccagctggcttgaaagtccctttgcttctccaccagaagcaggca
ttagcctggttactgtggcgggaaagtcagaagccacaaggagggattctggcggatgat
atgggcttaggaaaaaccctgacaatgatcgcactcatcctaaccaagaagaatcagaaa
agcaaggagaaggacaaaagcgtggactttattgctcttctctctcaagactcctctgtt
tttacctccaacggaacactaattgtctgccccgcttccctgatccatcactggaagaat
gaggtagagaaacatgtgcacagcaacagactcagaatctgtctctaccatgggccaaac
agaagtcggcaagccaaagagtaagctctctactatgacatcgtgattactacttacagc
cttctggccaaggagattcccacagcgaaggaagagggagacgtcccaggtttcaaactc
agtgtggagggcatctcagcacctttgcttcaagtagtctgggctcgaatcatattagat
gaagctcataacgtgaagaaccctcgagttcaggcatccatcgctgtgtgtaagctacaa
gctcaagcccggtgggctgtcacaggaacccccattcagaacaacctattggatatgtat
tcactaatgaagtttctccgctgtntcccgtttgatgagttcagttctttgaagagtcag
gttgacaatggttcanaagaaggaggagaacggttaagcattttaaccagaagccttnnt
gctgaggagacaaagaccaacctggattccaccgcaaaacctttgattccattggtttac
agagcttcctcctcccattccaggtgccgcttgccccagcgtagatttcagctgcaccgt
ttaacactttctgaggacgaacaggatgtttatgacgtctttcttgcatggtccaggtca
gctctgcagtcctatctaaagagacacgaaggaagaggcagccatcctggaagaagccct
gataatccattcagtagaggtaagccagagttcgggtccggtgtgccccagtgctccact
ccagcagactcacagagacccagcaccgttacgtccgtgtcccagcttctgcgacttcgc
cagtgcgcctgccacctctctctgctgaagtcggccctggacccaacagaanctgagagt
gaagacctcagcctgtccctggaagagcagctcagcgctctgaccctgtcccaagttgag
gtctcagagtcgtcacccactgtgtgtcttaatgggcgagtacgtcaacgtggagctttt
acagacacacgaaggagcaccaaggtgtcttatctgctggcagaactggatgcaatcgga
aaaggcccagggttccaaaagagtgtcattgtctcccagtggaccagcatgctgcaagta
gtagctctgcacctcagagcacggactgacttcgccgccattgacggctccgtcaacccc
aagcatagaatggacctggtggaggcgttcaaccactcccaggagcctcaggtcatgcta
atctccctcttggctggcggtgtgggactcaatctgaccggagggaaccatctcttcctt
ttggacatgcactggaacccctcgcttgaagaccaagcttgtgaccggatctacagagta
ggacagaagaaggatgtcgtcatacacaggttcgtctgtgaggggacagtggaagagaag
atcttacagctccaagaaaaaaagaaacatttggccaaacaagtcctatcgggatctgga
gcatctgtcaccaagctcacgctggctgacctcaagatcctctttggtatcctagcttcc
tctgctggtgctggtgtgcgctag
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