Arvicola amphibius (Eurasian water vole): 119800936
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Entry
119800936 CDS
T08327
Symbol
Ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamp03041
]
119800936 (Ddx20)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119800936 (Ddx20)
Spliceosome [BR:
aamp03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
119800936 (Ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
119800936
NCBI-ProteinID:
XP_038167253
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All DBs
Position
14:complement(17075863..17083942)
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AA seq
825 aa
AA seq
DB search
MAAAFEAPAALATAESAMAAERVAAPIPAPEPTPGSPWSLRTAHDIGGPRTRTGDVVLAE
PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLSPGSVRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEFLANALTRYMRDPTFVRLNPSDPSLIGLKQYYHVVNSYPLAHKIFEEKSQHL
QELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHC
RVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEEN
MMMKIAQKCNINLLPLPDPVPPGLMEECLDCDVEVTAALCTHSVPSLPTQTPKKQVQKPE
RAFQTQRIPGNQMPSPRNTSVSTVPAKSKHSSKQKPPVKIPSECGIIEKAAPPEELGCNT
QPEEQGKSSDQTAAEDFSSSSQQQAKEASSGPLPKIPCLSSFKVHQPCTLTFAELVEDYE
HYIKEGLEKPVEIIRHYTGPGAQTVNPHNGFVRNRISEDRAQILASSSQSGDSESESDSC
SSRTSSQSKGTKSYLEGSSDTQMKDSECTPVGGPLPLEQAVNGNDTPSQVECQESPETPM
KARHKEGASQRSKQSRRNPPRRSSYRAQTEPQEEAWYDCQRETDASFSDTYQDYEEYWRA
YYRAWQEYYAVASHSYYWNAQRHPSWMAAYQMNTMYLQEMMRSNQ
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcatttgaagccccggcggccctggcaaccgcggagtcagctatggcggcg
gagcgtgtggccgcgccgatcccggctccggagccaacccccggctccccgtggagcctg
cggaccgctcacgacatcggcgggccgcggacgcgtacaggggacgtggtgctggcggag
cccgcggatttcgagtcgctgctgctgtcgcggccggtgctggaggggctgcgggcggcc
ggcttcgagaggccgtctcccgtgcagctcaaggctatcccgctgggacgctgcgggctc
gatttaattgttcaagccaagtctggcactgggaaaacttgtgtattctctaccattgct
ctggactctcttattcttgaaaactatagtactcagattttgatactggctcctacaaga
gaaattgctgttcagatacattctgttatcacagccattggaataaaaatggaagggtta
gaatgtcacgtctttattggagggactccgttatcgcaagacaaaaccagacttaaaaag
tgtcatattgctgttggctctcctggaagaattaagcagctcatagaacttgactacctg
agtccgggcagtgtccgtctctttattcttgatgaagcagataagcttttagaagaaggc
agtttccaggagcaaataaattggatttactcttctttacctgctagtaaacagatgttg
gcagtatctgctacttatcctgaatttttggctaatgctttgacaaggtatatgagagat
cccacatttgtaaggttgaatcccagtgatccaagcctcataggtttgaagcagtactac
cacgtggtcaattcttaccctttggctcataagatttttgaagaaaagagtcagcattta
caggaactttttagtagaatcccatttaatcaagccttggtgttttctaatttgcacagc
agagctcaacatttggctgatatcctttcttctaaaggttttcctactgaatgcatttca
ggtaacatgaaccagaatcagcgcctcgatgctatggctaaactgaagcagtttcattgc
agagtcctcatttctacagatttgacttcccgtgggattgatgctgagaaggtgaatctg
gtagtaaatttggatgtgccgttagactgggagacatacatgcatcggattggcagagct
ggccgctttggcaccttgggactgacagtgacctactgctgtaggggggaagaagaaaat
atgatgatgaaaattgcccagaaatgtaacatcaaccttctccctttaccagaccccgtt
cctcctggcctgatggaagaatgcttggactgtgatgtggaggtcacagctgcactgtgt
acacacagcgtaccgagtctgcctacccagactcccaaaaagcaagttcagaaaccagag
agagccttccagactcaaagaattcctggtaaccaaatgccttcccctagaaatacttct
gtatctacagtcccagccaaatcaaagcacagtagtaaacaaaaacctcctgtgaaaatc
ccctcagagtgtggaatcatagaaaaggctgctccaccagaagagttgggctgtaacaca
caaccggaagagcaagggaagagttctgatcagaccgctgctgaggacttctccagtagc
agccagcagcaggccaaagaagcctcatctgggcccctccccaaaatcccttgtctctct
tccttcaaagttcatcagccatgtactttgacttttgcagaactggtagaggattatgaa
cactacattaaagaggggttagagaagcctgtggaaattatccggcactacacggggcct
ggggctcagactgtgaatcctcacaatggttttgtgcgaaatcgcatctctgaagataga
gcacagatactggcgagtagtagccagtctggggactcagagagtgagagcgattcttgc
agctcgaggacttcttcccagagcaagggcactaagtcatatttggaaggctcttctgac
actcagatgaaagactctgaatgtacacctgtgggtggacctctccctttggaacaggct
gtgaatggaaatgataccccaagtcaagtggagtgccaggagtctcctgaaaccccaatg
aaggcaaggcataaagaaggagctagccagagatctaagcagagtcggagaaatccacca
cggcgctcctcttaccgagcccagacagaaccccaggaggaggcttggtatgactgtcag
agggaaacagatgcgagtttctctgatacctaccaggattatgaggagtactggagagca
tattacagggcgtggcaagaatattatgctgttgcttcccactcgtactattggaatgct
cagagacatcccagttggatggctgcctaccagatgaatacaatgtatctacaagaaatg
atgcgcagtaaccagtga
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