Arvicola amphibius (Eurasian water vole): 119801072
Help
Entry
119801072 CDS
T08327
Symbol
Snx27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119801072 (Snx27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119801072 (Snx27)
Membrane trafficking [BR:
aamp04131
]
Protein recycling
Others
Others
119801072 (Snx27)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
119801072 (Snx27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
PDZ_2
USP7_C2
SNX17_FERM_C
UBX
RBD
RA_3
DarA_N
Ras_bdg_2
Pept_S41_N_bact
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
119801072
NCBI-ProteinID:
XP_038167455
LinkDB
All DBs
Position
14:complement(5622235..5703322)
Genome browser
AA seq
539 aa
AA seq
DB search
MADEDGEGIYPSAPHRNGGGGGGSGLHCAGNGGGGGCGPRVVRIVKSESGYGFNVRGQVS
EGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIR
AGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVV
YNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEY
LEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQVYQ
AIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTVRKWLF
TTEEEVLLNDNDLAVTYFFHQAADDVKKGHIKAEEKSYQLQKLYEQRKMVMYLNMLRTCE
GYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEE
GTAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRDVAT
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggacggggaagggatttacccctcagcccctcaccggaatggaggcggc
ggcggagggtctgggctccactgcgccgggaacggcggcgggggaggctgcggcccgcgg
gtcgtgcgcatcgtcaagtccgagtccggctacggcttcaacgtgcggggccaagtgagc
gagggcgggcaactgcggagcatcaacggggagctgtacgcgccgctgcagcatgtgagc
gccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggggaccgcatcctg
gaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtggtggacctgatccga
gcaggagagaaggaattgatcttgacagtgttgtctgtacctcctcatgaggctgataac
ctagatcccagtgacgactccttgggacaatcattttatgattacacagaaaagcaagca
gtgcccatatcggtccccacatacaaacatgtggagcagaatggtgagaagtttgtggtg
tacaacgtttacatggcagggcggcagctttgttctaagcggtaccgggaatttgccatc
ctgcatcaaaacctgaaaagggagtttgccaactttacatttcctcgactcccaggaaag
tggccgttctcattatcagagcaacagctcgatgcccggcgtcgcggactggaggaatat
ctagaaaaggtgtgttcaatccgagtcattggtgagagcgacatcatgcaggagttcctg
tcagaatctgacgagaattacaatggtgtgtctgatgtagagctgagagtagctttaccg
gatggaacaacagtcaccgtcagagttaaaaagaacagcactacagaccaagtgtaccag
gctattgcagcaaaggttggcatggacagtacaacagtgaattactttgccttatttgaa
gtgatcaatcattcctttgtacgtaagctggcacctaatgaatttcctcataaactctac
gtccagaattacacgtcagcggtgcccggcacctgcctgactgtccgcaagtggcttttt
accacagaggaagaggtcctcttaaatgacaatgaccttgctgttacatacttctttcat
caggctgctgatgatgtgaagaaaggtcacattaaagcagaggagaagtcttaccagtta
cagaagctatatgaacaaaggaaaatggtcatgtacctcaacatgctaaggacttgtgag
ggctacaatgaaatcatcttcccacactgtgcctgtgactccaggaggaaggggcacgtt
atcacagccatcagcatcacgcactttaagcttcatgcctgcactgaagaagggcagctg
gagaaccaggtgatagcatttgaatgggatgaaatgcagcggtgggacacagatgaagag
gggacggccttctgttttgaatatgcgcgaggagagaagaagcctcgatgggttaaaatc
ttcacgccatatttcaattacatgcatgaatgctttgagagggtattctgcgagctcaag
tggagaaaagagaatattttccagatggcgaggtcacagcagagggatgtggccacctag
DBGET
integrated database retrieval system
