Arvicola amphibius (Eurasian water vole): 119801681
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Entry
119801681 CDS
T08327
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013
Nucleocytoplasmic transport
aamp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119801681
03015 mRNA surveillance pathway
119801681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119801681
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119801681
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119801681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119801681
NCBI-ProteinID:
XP_038168220
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All DBs
Position
15:34950943..34975713
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AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMSSLQIKEEKIQADTNGVIKTSTSVEKTEEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADGYPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLDRGQKVSEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDTVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVVCNNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcttgggcgctggcggtggacgagcaggaagccgctgtcaagtcgatg
agcagtttgcagatcaaagaagaaaaaatccaagcagacacgaatggtgttatcaaaacc
agcacctctgtggagaagactgaggaggaagagaaagaggacagagctgctcagtcttta
ctcaacaagctgatcagaagcaatcttgtggataacaccaaccaagtagaagtcctgcag
agggacccaagctcgcctctctactcagtgaagtctttcgaagagcttcgtctgaaaccg
cagctcctccaaggagtctatgccatgggcttcaatcgaccgtccaagatccaggagaat
gcgttgcccatgatgcttgctgaacccccacagaacctgattgcccagtctcagtctggt
accgggaaaacagccgcctttgttttagctatgcttagcagagtggaaccagcagacgga
taccctcagtgtttgtgcttgtccccgacatatgaactggcacttcaaacgggaaaagtg
attgagcagatgggcaaatttcatccagaactgaagctagcttatgctgttagaggcaat
aaattggacagaggtcagaaggtcagtgagcagattgtcattggcacccccgggactgtc
ctggactggtgctccaagctgaagttcattgaccccaagaagatcaaggtgtttgttctg
gacgaggctgatgtgatgatagcaactcaaggccaccaagaccagagcatccgcatccag
aggatgctgcccagaaactgccagatgctgctcttctctgccacctttgaagatacagtg
tggaagtttgcccagaaggtggtcccagaccccaacatcatcaaacttaagcgtgaagag
gagactttggacaccatcaaacagtattatgtcgtttgcaataacagagaggagaagttc
caggccctgtgcaacctgtacggggccatcaccatcgcccaagccatgatcttctgccat
acccgcaaaacagctagctggctggcagctgagctctccaaggagggccaccaggtggct
ctgctgagtggggagatgatggtggagcagagggcagctgtgattgagcgcttccgagaa
ggcaaagagaaggtcctggtgaccaccaacgtgtgtgcccgtggtattgatgttgaacaa
gtgtctgtcgtcatcaattttgaccttcctgtggacaaggatgggaacccggacaatgag
acctacctgcaccgcatcgggcgcacgggccgctttggcaagaggggtctggctgtcaac
atggttgacagcaagcacagcatgaatatcctcaacagaatccaggagcattttaataag
aagatagaaagactggacacagacgatttggatgagatcgagaaaatagccaactga
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