KEGG   Arvicola amphibius (Eurasian water vole): 119801872
Entry
119801872         CDS       T08327                                 
Symbol
Rad23a
Name
(RefSeq) UV excision repair protein RAD23 homolog A isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp03420  Nucleotide excision repair
aamp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119801872 (Rad23a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    119801872 (Rad23a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:aamp03051]
    119801872 (Rad23a)
   03400 DNA repair and recombination proteins [BR:aamp03400]
    119801872 (Rad23a)
Proteasome [BR:aamp03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    119801872 (Rad23a)
DNA repair and recombination proteins [BR:aamp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      119801872 (Rad23a)
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD UBA_3 Rad60-SLD_2 USP_UIM_N Crinkler Ubiquitin_2
Other DBs
NCBI-GeneID: 119801872
NCBI-ProteinID: XP_038168533
LinkDB
Position
15:14662645..14668771
AA seq 362 aa
MAVIITLKTLQQQTFKIRMEPEETVKVLKEKIEAEKGREAFPVAGQKLIYAGKILSDDVP
IKEYHIDEKNFVVVMVTKTKTGQGTPAPLEVSPTAASESSTPFPPAPASGMSHPPPPRSE
DKSPSEDSATTSPESISGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVV
AALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVPEQPATETAVENPLEFLRDQPQF
QNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPLGELPDVSDVEGEV
GAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFD
DE
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggccgtcatcatcacacttaaaacgttgcagcagcagaccttcaagatacgcatggag
cctgaggagacggtgaaggtgctgaaggaaaagatagaagctgagaagggtagagaagct
ttccctgtggctggacagaagctcatctatgctggcaagatcttgagtgatgatgtcccc
atcaaggaataccatatagatgagaagaactttgtggttgtcatggtgaccaagaccaag
actggccagggtactccagcacccctagaggtctcacctactgctgcctcggaatcctcc
acacctttccctccggccccagcatcagggatgtcccatcctccacctcccaggagtgag
gacaagagcccatcagaagattcagccaccacatctccagaatccatttctggctctgtt
ccctcttcaggtagcagcgggcgagaggaagacgcagcttccacattagtgactggctct
gagtatgagacgatgctgaccgagatcatgtccatgggctacgagcgggaacgggttgtg
gccgcgctgagggccagctacaacaacccccacagagctgtggagtacttgctcacggga
attcccggaagccccgagccggaacatggttctgtccaggagagccaggtaccagaacag
ccggccacagaaacagcagtggagaaccccctggagttcctgcgggaccagccccaattc
cagaatatgcgacaagtaattcagcagaacccagcgctgctccctgcactgctccagcag
ctgggccaggagaaccctcagctcttgcagcaaatcagccgtcaccaggagcagttcatc
cagatgctgaatgagcccctgggggagctgccggacgtctctgatgtagagggcgaggtt
ggtgccatcggggaggaggccccacagatgaactatatccaggtgacgccgcaggagaag
gaagctatagaaaggctgaaggcactgggcttcccagagagcctggtgatacaggcctac
ttcgcgtgtgaaaaaaatgagaacttggctgccaacttcctcctgagtcagaactttgat
gatgagtga

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