Arvicola amphibius (Eurasian water vole): 119801914
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Entry
119801914 CDS
T08327
Symbol
Amfr
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04137
Mitophagy - animal
aamp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119801914 (Amfr)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119801914 (Amfr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119801914 (Amfr)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
119801914 (Amfr)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119801914 (Amfr)
Multi subunit type E3
ERAD complex
119801914 (Amfr)
LMBR1L-GP78-UBAC2 complex
119801914 (Amfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
SVIP
Motif
Other DBs
NCBI-GeneID:
119801914
NCBI-ProteinID:
XP_038168605
LinkDB
All DBs
Position
15:5759037..5800357
Genome browser
AA seq
643 aa
AA seq
DB search
MPLLFLERFPWPSLRTYTGLSGLALLGTIVSAYRALSQPEAGSGEPEPLTAPLQPEALVP
SRLAAGGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPM
SSHGRVLSLLIAMLLSCCGLAVVCCVTGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIH
LWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLF
HNSCLRSWLEQDTSCPTCRMSLNIADGSRAREDHQGENLDENLVPVAAAEGRPRLNQHNH
FFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDL
QMTRSVEITTDNILEGRIQVPFPTQRSESLRPALNSPVERPSTDQEDGEASVQTERVPLD
LNPRLEEALDFSEVEVEPSEVDDFEARGSRFSKSADERQRMLVQRKDDLLQQARKRFLNK
SSEDDMTSESLPSSEGTSSDPVTLRRRMLAAAAERRLQRQQTT
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctgttcctcgagcgcttcccgtggcccagcctccgcacctacacgggcctc
agcggcctggccttgctcggcaccatcgtcagcgcctaccgcgccctcagccagccggag
gccgggtccggcgagccggagccgctaacggccccgctgcagcccgaggcgctcgtgccg
tcgcgtctggccgccggcggcccccgggcccgcgacgtggcccagtacctgctgtcggac
agcctgttcgtgtgggttctggtgaacactgcttgctgtgttttgatgttggtggctaag
cttatccagtgtattgtgtttggtcctcttcgagtgagtgagagacagcatctcaaagac
aagttttggaattttattttctacaagttcattttcatttttggtgtgctgaatgtccag
actgtggaggaggtggtgatgtggtgcctctggtttgccggacttgtttttctgcacttg
atggttcagctctgcaaagaccgatttgaatatctttccttctctcccaccacaccaatg
agcagccacgggcgagtcctgtctttgttgattgctatgctgctctcctgctgtggactg
gcagttgtctgctgtgtcacaggctacacccatggcatgcacaccttggctttcatggct
gcagagtctcttcttgtgacagtgaggacagctcatgtgattttaagatatgtaattcac
ctctgggacctcaaccatgaagggacttgggaaggaaagggaacctacgtgtattacacc
gattttgtcatggagctcactctcttgtccttggacctcatgcaccacatccacatgctg
ttgtttggcaacatctggttatctatggctagcctggtcatctttatgcagcttcgttac
ctgttccatgaggtacagcggcggatccgtcgacacaagaactacttgcgggtggtaggg
aacatggaagccaggtttgcagtcgccactccagaggagctagctgtcaataacgacgac
tgtgccatctgctgggactctatgcaggctgcaaggaaacttccctgtggacatctcttt
cacaactcctgccttcgttcttggctagaacaagacacgtcctgtccgacgtgcagaatg
tctcttaatattgcggatggcagtcgtgccagggaagaccatcaaggagagaacttggat
gagaacttggtccctgtggcagctgcagaaggcagacctcgcttaaaccagcacaatcac
ttcttccactttgatgggtcccggattgcgagctggctcccgagtttttcagttgaagtg
atgcacactaccaacattcttggtatcacgcaggcgagcaactcacagctgaatgccatg
gcacatcagattcaagagatgttcccccaggtcccataccaccttgtgctccaggacctc
cagatgacacgctccgtggaaataacaacagacaacatcttagaaggacgtattcaagta
cctttccccacacagaggtcagagagcctgaggcctgcactaaacagcccagtggaaagg
cctagcactgatcaggaggacggggaagcctctgttcagacggagcgtgtaccgctggac
ctcaatcctcgccttgaagaggccttggacttcagtgaggtagaagtggagcccagtgag
gtggacgactttgaggctcgggggagccgcttctccaagtctgctgacgagagacagcgc
atgttagtccagcgcaaggatgacctcctgcagcaagcccggaagcggttcttgaacaaa
agttctgaagacgatatgacctcagagagtctcccctcctctgaaggcacatcctctgac
cctgtgaccctgcgccggaggatgctggcggctgctgctgagaggagacttcagaggcag
cagacaacctag
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