Arvicola amphibius (Eurasian water vole): 119801940
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Entry
119801940 CDS
T08327
Symbol
Usb1
Name
(RefSeq) U6 snRNA phosphodiesterase
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamp03041
]
119801940 (Usb1)
Spliceosome [BR:
aamp03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
119801940 (Usb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
119801940
NCBI-ProteinID:
XP_038168657
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Position
15:complement(4467300..4478836)
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AA seq
272 aa
AA seq
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MSEAPLVGYSSSGSEDEAEAAAAAAAAAGRSKPGSGGRRCGQNPLPTQRFPVPDSVLSMF
SDVEEGPEDDSTKHGGRIRSFPHERGNWATHIYIPYEAKEEFLDLLDLLLHRAQTFVPRL
VRMEEFHLSLSQSVVLRHHWILPFVQVLKDHMASFQRFFFTANQVKIYTNQEKTRTFIGL
EVSSGHAQFLDLVSEVDRVMEEFDLTTFYQDPSFHVSLAWCVGDARLQLEGQCLRELQEI
VDEFEDSEMLLRVLAEQVRCKSGNKFFSMPLK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgcccctggtgggctacagcagcagcggttcggaggatgaagccgaggcc
gccgccgccgccgccgccgccgcggggcggagcaaacccgggtcggggggccgccgctgt
ggccagaacccccttcccactcagaggttcccagtacctgacagtgtgctgagcatgttc
tctgacgtggaggaggggcccgaggatgacagtacaaaacacggggggcgcattcgctcc
tttccccatgagcgcggcaactgggccacccacatctacataccgtacgaagcgaaggaa
gagttcctggatctgctcgacttgctgctgcaccgagctcagacgttcgtgccccgcctg
gtgcggatggaggagttccacctcagcctgtctcagagcgtggttctccggcaccactgg
atccttcccttcgtgcaggtgctcaaagatcacatggcctctttccaaaggttcttcttt
actgccaaccaggtaaagatttataccaaccaagagaaaaccaggaccttcattgggctc
gaggtcagttcagggcatgcccagttcctggacctggtttcagaggtagacagagtcatg
gaggaatttgacctcaccaccttctaccaggacccttcatttcacgtcagcctggcctgg
tgtgtgggtgacgcacggctccagctggagggacagtgcctgcgggaactacaggaaatc
gtggatgagtttgaagactctgagatgctgctgcgtgtgctggctgagcaggtccgctgc
aagtccgggaacaaattcttctcaatgcctttgaagtga
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