Arvicola amphibius (Eurasian water vole): 119801951
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Entry
119801951 CDS
T08327
Symbol
Katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamp04812
]
119801951 (Katnb1)
Cytoskeleton proteins [BR:
aamp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
119801951 (Katnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
ANAPC4_WD40
NBCH_WD40
RMC1_N
eIF2A
WDR54
PROPPIN
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
119801951
NCBI-ProteinID:
XP_038168673
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Position
15:complement(4694110..4713197)
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AA seq
700 aa
AA seq
DB search
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVTQDPVQASQPLTQQTSNPGVSLRRIYERPSTTCSKPQRVKHNSESERRS
PSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRKSEPFPAPPEDDIATAKEASKP
SPAMDVQLPVPNLEVSARPPVLTSTPAPKGEPAIIPATRNEPIGLKASDFLPAVKVPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWSTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAP
PSVGVDISREERLHKCRLCFKQLKSISGLVKSKSGLSGRHGSAFLCCMPMAHEPQLGLHS
CPDGHPGGSIASPLTTVVDLQLPLLSGSSCTVLLLRATPA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggccacccctgtggtcaccaagactgcctggaagttgcaagagatcgtggcccatgcc
agcaatgtgtcctcgttggtgcttggcaaggcctcagggcggctgttggccactggtgga
gatgactgccgtgtcaacctgtggtccatcaacaagcctaactgcatcatgagcctgaca
ggtcatacgtcccctgtggagagtgtccgcctcaacacccctgaggagctcatcgtagcc
ggttcccagtcgggctccattcgtgtctgggacctggaagctgccaaaattctccgcaca
ctcatggggcacaaagccaacatctgcagcctggatttccacccctatggcgaatttgtg
gcctcaggttcccaggacacaaatatcaagctctgggacatcaggaggaaaggctgtgtc
ttccgatacagggggcacagccaggctgtgcggtgtctccggttcagccctgatgggaag
tggctggcctcggcagcggatgaccacacagtgaagctctgggatctgacagctggcaag
atgatgtctgagttccctggtcacacagggcctgtgaacgtggtggagtttcaccccaat
gagtatctcctagcttctggcagctccgacaggacgatccgcttctgggacctggagaag
ttccaggtggtgagctgcattgaaggggagccagggcctgtcaggagcgtcctcttcaac
cccgacggctgctgcttgtacagcggctgccaggactcactgcgcgtctacggttgggag
cctgagcgctgctttgatgtggtccttgtcaactggggcaaggtggctgatctggccatc
tgtaatgaccagctgataggtgtggccttctcccagagcaacgtttcctcttacgtggtg
gacctgacgagagtcaccaggacaggcactgtgacccaggaccctgtgcaggctagccag
cctctgacacagcagacctccaaccctggtgtctccctccgccgcatctatgagcggccc
agcacaacctgcagcaagcctcagagggtaaagcacaactcggagagtgagcggcgcagc
cccagcagcgaagatgacagggacgagcgtgagtcccgggccgagatccagaatgctgag
gactacaatgagatcttccagcccaagaacagcatcagtcggacaccgcctcggaaaagt
gagcccttcccagcgcccccagaagatgacatagccacagcaaaggaggcctcaaaacct
agcccagccatggatgtgcagctgccggtgccaaatctcgaggtctcagcccgacctcca
gtcttgacttccactcctgcacccaagggcgagcctgccatcatccctgccacacggaat
gagcccattggcctaaaggcctctgacttcctgcccgccgtgaaggtcccgcagcaggct
gagctggtggatgaggatgccatgtcacagatacggaaaggccacgacaccatgtgtgtg
gtgcttaccagccgccacaagaacctggacactgtacgggctgtgtggagcacgggagat
atcaagacatcagtggactctgcagtggccatcaatgacctgtctgtggtagtagacctt
ctgaacattgtcaaccagaaagcctcgctgtggaagctggacctgtgcaccacagtgctg
ccacagattgagaagcttctgcagagcaagtatgagagctatgtccagaccgggtgcacc
tccctgaagctgatcctgcagcggttcctgcccctcatcactgacattttggcagccccg
ccttctgtgggtgtggacatcagcagagaggagaggctgcacaagtgccgactctgcttc
aaacaactcaagagcatcagtggcctcgtcaagagcaagtcaggtctgagtggccgccat
ggcagtgccttcctttgctgtatgcccatggcccatgagcctcagcttggcctccactct
tgccctgatggccatcctggaggcagcatcgccagcccactgaccacagttgtggactta
caacttcctctcctctccggcagcagctgcacagtcttgcttctcagggcaactccagcc
tag
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