Arvicola amphibius (Eurasian water vole): 119801951
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Entry
119801951 CDS
T08327
Symbol
Katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamp04812
]
119801951 (Katnb1)
Cytoskeleton proteins [BR:
aamp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
119801951 (Katnb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
eIF2A
WDR54
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_NWD2_C
Beta-prop_LRRK2
VPS8_N
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
119801951
NCBI-ProteinID:
XP_038168673
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Position
15:complement(4694110..4713197)
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AA seq
700 aa
AA seq
DB search
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVTQDPVQASQPLTQQTSNPGVSLRRIYERPSTTCSKPQRVKHNSESERRS
PSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRKSEPFPAPPEDDIATAKEASKP
SPAMDVQLPVPNLEVSARPPVLTSTPAPKGEPAIIPATRNEPIGLKASDFLPAVKVPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWSTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAP
PSVGVDISREERLHKCRLCFKQLKSISGLVKSKSGLSGRHGSAFLCCMPMAHEPQLGLHS
CPDGHPGGSIASPLTTVVDLQLPLLSGSSCTVLLLRATPA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggccacccctgtggtcaccaagactgcctggaagttgcaagagatcgtggcccatgcc
agcaatgtgtcctcgttggtgcttggcaaggcctcagggcggctgttggccactggtgga
gatgactgccgtgtcaacctgtggtccatcaacaagcctaactgcatcatgagcctgaca
ggtcatacgtcccctgtggagagtgtccgcctcaacacccctgaggagctcatcgtagcc
ggttcccagtcgggctccattcgtgtctgggacctggaagctgccaaaattctccgcaca
ctcatggggcacaaagccaacatctgcagcctggatttccacccctatggcgaatttgtg
gcctcaggttcccaggacacaaatatcaagctctgggacatcaggaggaaaggctgtgtc
ttccgatacagggggcacagccaggctgtgcggtgtctccggttcagccctgatgggaag
tggctggcctcggcagcggatgaccacacagtgaagctctgggatctgacagctggcaag
atgatgtctgagttccctggtcacacagggcctgtgaacgtggtggagtttcaccccaat
gagtatctcctagcttctggcagctccgacaggacgatccgcttctgggacctggagaag
ttccaggtggtgagctgcattgaaggggagccagggcctgtcaggagcgtcctcttcaac
cccgacggctgctgcttgtacagcggctgccaggactcactgcgcgtctacggttgggag
cctgagcgctgctttgatgtggtccttgtcaactggggcaaggtggctgatctggccatc
tgtaatgaccagctgataggtgtggccttctcccagagcaacgtttcctcttacgtggtg
gacctgacgagagtcaccaggacaggcactgtgacccaggaccctgtgcaggctagccag
cctctgacacagcagacctccaaccctggtgtctccctccgccgcatctatgagcggccc
agcacaacctgcagcaagcctcagagggtaaagcacaactcggagagtgagcggcgcagc
cccagcagcgaagatgacagggacgagcgtgagtcccgggccgagatccagaatgctgag
gactacaatgagatcttccagcccaagaacagcatcagtcggacaccgcctcggaaaagt
gagcccttcccagcgcccccagaagatgacatagccacagcaaaggaggcctcaaaacct
agcccagccatggatgtgcagctgccggtgccaaatctcgaggtctcagcccgacctcca
gtcttgacttccactcctgcacccaagggcgagcctgccatcatccctgccacacggaat
gagcccattggcctaaaggcctctgacttcctgcccgccgtgaaggtcccgcagcaggct
gagctggtggatgaggatgccatgtcacagatacggaaaggccacgacaccatgtgtgtg
gtgcttaccagccgccacaagaacctggacactgtacgggctgtgtggagcacgggagat
atcaagacatcagtggactctgcagtggccatcaatgacctgtctgtggtagtagacctt
ctgaacattgtcaaccagaaagcctcgctgtggaagctggacctgtgcaccacagtgctg
ccacagattgagaagcttctgcagagcaagtatgagagctatgtccagaccgggtgcacc
tccctgaagctgatcctgcagcggttcctgcccctcatcactgacattttggcagccccg
ccttctgtgggtgtggacatcagcagagaggagaggctgcacaagtgccgactctgcttc
aaacaactcaagagcatcagtggcctcgtcaagagcaagtcaggtctgagtggccgccat
ggcagtgccttcctttgctgtatgcccatggcccatgagcctcagcttggcctccactct
tgccctgatggccatcctggaggcagcatcgccagcccactgaccacagttgtggactta
caacttcctctcctctccggcagcagctgcacagtcttgcttctcagggcaactccagcc
tag
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