Arvicola amphibius (Eurasian water vole): 119801992
Help
Entry
119801992 CDS
T08327
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119801992 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119801992 (Vps35)
Membrane trafficking [BR:
aamp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
119801992 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
FerA
CENP-O
Imm5
ADIP
Motif
Other DBs
NCBI-GeneID:
119801992
NCBI-ProteinID:
XP_038168749
LinkDB
All DBs
Position
15:14032354..14062790
Genome browser
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPADEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSQVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRSR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcaccccaggatgagcaggaaaaactcttggatgaagccatc
caggctgtgaaggttcagtcattccagatgaaaagatgcctggacaaaaacaagctgatg
gatgctctgaaacacgcctccaacatgcttggggagctccgcacctctatgctgtcacca
aagagttactatgaactttatatggctatttctgatgaactgcactatttggaggtttat
ctgactgatgagtttgctaaaggaagaaaagtggcagatctctatgaacttgtacagtat
gctggaaacattattccaaggctttatctgctgatcacagttggagttgtatatgtcaag
tcatttcctcagtccaggaaagatattttgaaagacttggtagaaatgtgtcgtggtgtg
cagcatccactgaggggtttgtttctccgaaactatcttcttcagtgtactaggaacatt
ttacctgatgaaggggagccagcagatgaagaaacaactggtgatatcagtgactccatg
gactttgtgctgctcaactttgcagaaatgaacaaactctgggtgcggatgcaacatcaa
ggacatagccgagatagagaaaaaagggagcgggagcgacaagaactgagaattttagtg
ggaacaaatttggtgcggcttagccagctggaaggtgtaaatgtggaacgttacaaacag
attgttttaacaggcattttggagcaagttgtgaattgtagagatgctttggctcaggag
tatctcatggaatgtattattcaggtttttccggatgagttccatctccaaactttgaat
ccttttcttagagcgtgtgctgagttacatcaaaatgtcaatgtgaagaacataattatt
gctttaattgacagattagctttatttgctcatcgtgaagatggacctggaattccagct
gagattaaactttttgacatattttcacaacaggtggctacagtaatacagtccagacaa
gacatgccatcagaggatgttgtatctttacaagtctctctcattaaccttgctatgaaa
tgttaccctgatcgtgtggattatgttgataaagttctagaaacaacagtggagatattc
aataagcttaaccttgaacatattgccaccagtagtgcagtttcaaaggagcttaccaga
cttttgaagatacctgttgacacttacaacaatatcttaacagtcttaaaactaaaacat
ttccacccactctttgagtacttcgactatgagtccagaaagagcatgagctgttatgtg
cttagtaatgttctggattataacacagaaatcgtctctcaggaccaggtagactccata
atgaatttggtgtccacgttgattcaggatcagccagatcaacctgtggaagaccctgat
ccggaagattttgctgatgaacagagccttgttggccgattcattcatcttctacggtct
gatgatcctgatcagcagtacttgattttgaatacagcaagaaaacattttggagctggt
ggaaatcaacggattcgcttcacactgccacctttggtgtttgcagcttaccagctggct
tttcgatacaaagagaattctcaagtggatgacaagtgggaaaagaaatgccagaagatt
ttttcatttgctcaccagactattagtgctttgatcaaagctgagctggctgaattaccg
ctgagactctttcttcaaggagcgctagctgctggagaaattggctttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctctatatgaagatgagatcagtgac
tctaaagcacagctggctgctatcaccttgatcattggtacttttgagaggatgaagtgc
ttcagtgaggagaatcatgagcccttgagaactcagtgtgctcttgctgcatcaaaactt
ctgaagaaaccagatcaaggccgagctgtgagcacatgtgcacatctcttttggtctggt
cgaaacacagacaaaaatggggaggagcttcatggaggcaaaagggttatggagtgccta
aagaaggctctaaaaatagcaaatcagtgcatggacccctcgctacaagttcagctcttt
atagagattctgaatcggtacatctatttctatgagaaagaaaatgatgcggtaacaatt
caggtcttgaatcaacttattcaaaagattcgagaagatctcccaaatcttgagtccagt
gaggaaacagagcaaattaacaagcattttcataacacgttggagcatttgcgctcaagg
cgggaatcaccagagtctgaggggccaatctatgaaggtctcatcctttaa
DBGET
integrated database retrieval system
