Arvicola amphibius (Eurasian water vole): 119802036
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Entry
119802036 CDS
T08327
Symbol
Cdh16
Name
(RefSeq) cadherin-16 isoform X1
KO
K06810
cadherin 16, KSP-cadherin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119802036 (Cdh16)
Cell adhesion molecules [BR:
aamp04515
]
Cadherins
Major cadherins
119802036 (Cdh16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
119802036
NCBI-ProteinID:
XP_038168808
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All DBs
Position
15:complement(31149672..31159195)
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AA seq
830 aa
AA seq
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MISACLWLFCLAVIQAFTTEAQPAELHAEVPENYGGNFPFYIIKLPLPLERAEGQIVLSG
GSSTDAQDPFAVDPESGFLVATKALDREEKAEYQLQVTLESKDGHILWGPQPVTVHVKDE
NDQVPQFSQAIYRARLSQGTRPGIPFLFLAASDGDAPGTANSDLRFHILNQSPVQPFPDM
FQLDPRLGALALSPRGSASLDRVLEGPYHLLVQVKDMGDQASGHQAIATVEISIVQSTWV
PLEPVHLAENLQVAYPHNIAQVHWNGGDVHYQLQSQPPGPFNMDAEGRIHVTAELDREAQ
AEYLLQIQAQNSRGEDFAEPLELPVVVTDKNDNTPVCSPHDPAISIPELSPPGTEVITLS
AEDMDAPGSPNSHVVYRLLSPEPEEGAEEKTFKLDSTTGRVTLGTAPLHPGQNILLQVLA
VDLAGSEGGLSSTCEVAVTITDINNHAPEFITSQIGPVSLPEDVKPGVLVATLTATDADL
EPAFRLMDFAIEEGDPKGIFDLAWEPDSDHVQLRLRKNLSYEAAPHHKVVVVVRNVEELV
GPDPGPGATATVTVLVERVIPPLKLDQESYETSIPVSTPAGSLLLTIHPSEPTSRALRFS
LVNDSEGWLCIKEGSGEVHTARSLRGAKPGDTYTVLVEAQDTDEPGLSTSTTIVVHFLKA
SPVPRLTVAPGPSRHLCTPRQDYGVVVSGASEDPDLANRHGPYSFALGPNPTVQRDWRLQ
PFNDSHAYLTLALHWVEPGEYMVPVVVHHDAQMWQLQVQVFVCRCNLDGQCMRKVGRMKG
MPTKLSAVGVLLGTLAAIGFILMLVFTHLALARKKDLGQPADSVPLKAAV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatctctgcctgcctgtggctgttttgccttgctgttattcaggctttcaccaccgag
gcccagcctgcagagctgcatgcagaagtccctgaaaactacggtggaaacttccccttc
tacataatcaagctaccgctacccctcgagagggctgaaggccagattgtcctatcaggt
ggctcaagcacagatgctcaagacccctttgctgtggatcctgagtctggctttctggtg
gcaacaaaggccctggacagggaggaaaaggccgagtaccaactacaggtcaccttggag
tctaaggatggacatatcttgtggggtccacagcccgtgactgtgcatgtgaaagatgag
aatgaccaggtaccccaattctcccaagccatctacagagctcggctaagccagggcacc
aggcctgggatcccctttctcttccttgcggcttctgatggggatgcaccgggcacagcc
aactcagaccttcgattccacatcctgaatcagtccccagttcaacctttcccagatatg
ttccagctggaccctcgactaggagctctggccctcagtcccaggggaagcgccagccta
gaccgtgtcctcgaagggccttaccacctgttggtacaggtcaaggacatgggtgaccag
gcctcaggccaccaagccatcgccactgtggagatctccatagtacagagcacttgggta
cctctagagcctgttcacctagcagagaatctacaggttgcatacccacacaacattgcc
caggtccactggaatggaggagatgtacattatcaactgcagagtcagcctccgggaccc
ttcaacatggatgcagaggggagaatccatgtaactgcggagctggaccgagaggcccag
gctgagtacctgctccaaatacaagctcagaattcccgtggtgaggactttgcggaaccc
ctggagttgccggtggtggtgaccgataagaatgacaacacccctgtctgctccccgcat
gacccagcaatcagcatccctgagctcagccccccaggaactgaagtgattacactgtca
gcagaggacatggatgcccctggatcacccaactcccacgttgtatatcggttgttgagc
cctgagcctgaagagggggctgaagaaaaaaccttcaagttagattctaccacaggccga
gtaacactgggaactgccccactccacccaggccagaacatcctgcttcaggtgctggct
gttgacttagcaggatcagagggtggtctcagcagcacatgtgaggtggcggtcacaatc
accgacatcaacaaccatgcccctgagttcatcacttcccagattggacctgtaagtctc
cctgaagatgtgaagccgggggttctggtggccacgcttacggccactgatgctgacctt
gagcctgccttccgccttatggactttgccattgaagaaggagacccgaaagggatcttt
gacctggcttgggagccagactctgatcatgtccagcttagactccgaaagaacctcagc
tatgaggcagctcctcatcacaaggtggtagtagtagtgcggaacgtggaggaactggtg
ggcccagacccaggccctggagccacagccacagtgactgtattggtggaaagggtgata
ccgcccctcaagctggaccaggagagctatgagaccagcatcccagtgagcaccccagct
ggctccctcctgctgaccattcatccctcagagcccactagcagagccctcaggttctcc
ctggtcaatgactcagagggctggctctgcatcaaggagggctctggggaggtgcacaca
gcccggtccctgcggggtgccaagcctggggacacctacacagtgctcgtggaggcccaa
gacacagatgaaccagggctgagcacttctaccaccatcgtggtccatttcctgaaggcc
tctcccgtcccaagattgactgtagcccctgggcccagcagacacctctgtacaccccgc
caagactacggtgtggttgtcagtggggccagtgaggatcctgacctggccaataggcat
ggtccctacagctttgctcttggtcccaaccccaccgtgcagcgggactggcgcctccag
cctttcaatgattcccatgcctacctaaccttggccttgcattgggtagagccaggtgaa
tacatggtaccggtggttgtccaccatgatgcccagatgtggcaactccaggtccaagtg
ttcgtgtgtcgctgcaatctggacggccaatgcatgcgcaaggtgggccgcatgaagggc
atgcctacgaagctgtcagcagtgggtgtcctcttgggtaccctggcagccataggcttc
atcctcatgcttgtcttcacccacctggcactggcaaggaagaaggacctgggtcagcca
gcagacagtgttcccctgaaggcagcagtgtga
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